Anoosha-Sehar
Graduate Research Assistant, Centre for Infectious Disease Genomics and One Health (CIDGOH)
Hsiao's Lab at Simon Fraser UniversityBurnaby, Canada
Pinned Repositories
ete
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
foodon
The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.
foodon-ids-update
foodon-wikipedia
A tool for managing the collection of wikipedia entry cross references, definitions and images for FoodOn entities.
FoodOn_Learning
For learning purpose
genepio
The Genomic Epidemiology Application Ontology describes the genomics, laboratory, clinical and epidemiological contextual information required to support data sharing and integration for foodborne infectious disease surveillance and outbreak investigations.
pokay
Report salient qPCR primer/probe or immune epitope mismatches info against a set of pathogen isolate genomes
R-Shiny_Course
taxonomy_ranks
To get taxonomy ranks information with ETE3 Python3 module (http://etetoolkit.org/)
foodon
The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.
Anoosha-Sehar's Repositories
Anoosha-Sehar/ete
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
Anoosha-Sehar/foodon
The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.
Anoosha-Sehar/foodon-ids-update
Anoosha-Sehar/foodon-wikipedia
A tool for managing the collection of wikipedia entry cross references, definitions and images for FoodOn entities.
Anoosha-Sehar/FoodOn_Learning
For learning purpose
Anoosha-Sehar/genepio
The Genomic Epidemiology Application Ontology describes the genomics, laboratory, clinical and epidemiological contextual information required to support data sharing and integration for foodborne infectious disease surveillance and outbreak investigations.
Anoosha-Sehar/pokay
Report salient qPCR primer/probe or immune epitope mismatches info against a set of pathogen isolate genomes
Anoosha-Sehar/R-Shiny_Course
Anoosha-Sehar/taxonomy_ranks
To get taxonomy ranks information with ETE3 Python3 module (http://etetoolkit.org/)