AntoinePassemiers
PhD student at KULeuven. Expertise in AI, Optimization & Bioinformatics.
ESAT/STADIUS, KULeuvenBelgium
Pinned Repositories
ArchMM
A Cython Machine Learning library dedicated to Hidden Markov Models
Beyond-Gradient-Descent
Minimalist deep learning library with first and second-order optimization algorithms made for educational purpose
Cythrinsic
Header files for allowing Intel intrinsics in Cython
Encoder-Forest
eForest: Reversible mapping between high-dimensional data and path rule identifiers using trees embedding
Lexicon-Based-Sentiment-Analysis
Lexicon-based sentiment analysis inspired by Syuzhet R package
Neuhon
Musical key detection library & Bachelor thesis on key detection
P-Center-Problem
Solving P-Center Problem using P1 and P3 formulations
Realistic-Mouse
Realistic mouse movements for building click bots
Scythe
Deep learning library based on the gcForest algorithm
Stochastic-Unit-Commitment
Stochastic Unit Commitment for Renewable Energy Supply using Lagrangian Decomposition
AntoinePassemiers's Repositories
AntoinePassemiers/ArchMM
A Cython Machine Learning library dedicated to Hidden Markov Models
AntoinePassemiers/Stochastic-Unit-Commitment
Stochastic Unit Commitment for Renewable Energy Supply using Lagrangian Decomposition
AntoinePassemiers/Encoder-Forest
eForest: Reversible mapping between high-dimensional data and path rule identifiers using trees embedding
AntoinePassemiers/Lexicon-Based-Sentiment-Analysis
Lexicon-based sentiment analysis inspired by Syuzhet R package
AntoinePassemiers/Realistic-Mouse
Realistic mouse movements for building click bots
AntoinePassemiers/Scythe
Deep learning library based on the gcForest algorithm
AntoinePassemiers/Beyond-Gradient-Descent
Minimalist deep learning library with first and second-order optimization algorithms made for educational purpose
AntoinePassemiers/Cythrinsic
Header files for allowing Intel intrinsics in Cython
AntoinePassemiers/PFSP-WT
Heuristic solver based on Ant Colony Optimization and designed for the Permutation Flow Shop Scheduling Problem with Weighted Tardiness (PFSP-WT)
AntoinePassemiers/PORTIA-Manuscript
Source code for the paper "Fast and Accurate Inference of Gene Regulatory Networks through Robust Precision Matrix Estimation", by Passemiers et al.
AntoinePassemiers/MMO-Torch
Matrix Manifold Optimization with PyTorch
AntoinePassemiers/Cython-Project-Template
Ready-to-use and simple Cython template for long-term projects (with NumPy support)
AntoinePassemiers/Oriana
Variational Inference library for Probabilistic Count Matrix Factorization (pCMF) and single-cell expression data analysis
AntoinePassemiers/Master-Thesis
Master Thesis on Protein Contact Prediction
AntoinePassemiers/MKP
Heuristic Solver for the Multidimensional Knapsack Problem
AntoinePassemiers/Recursive-Least-Squares-Algorithm-With-Kafka-And-Spark
Remote repository for the INFO-H-515 Big data project (phase 2)
AntoinePassemiers/Wasserstein-Mass-Spectrometry
Unofficial implementation of the paper "The Wasserstein Distance as a Dissimilarity Measure for Mass Spectra with Application to Spectral Deconvolution"
AntoinePassemiers/Wynona
Protein Residue Contact Prediction based on a Deep Neural Architecture
AntoinePassemiers/GDE-GaussFold
Lightning-Fast Template-free Protein Folding based on Predicted Residue Contacts and Secondary Structure
AntoinePassemiers/Open-Challenges-Single-Cell-Perturbations
20th solution for Kaggle's competition "Open Problems – Single-Cell Perturbations"
AntoinePassemiers/PORTIA
A Lightning-fast algorithm for Gene Regulatory Network inference from gene expression data
AntoinePassemiers/NIH-EEG
[Kaggle] HMM-based application for predicting seizures from intracranial EEG recordings
AntoinePassemiers/P-Center-Problem
Solving P-Center Problem using P1 and P3 formulations
AntoinePassemiers/AntoinePassemiers
Config files for my GitHub profile.
AntoinePassemiers/Bitonic-Sort
Sorting arbitrary sequences using a bitonic sort algorithm distributed with MPI
AntoinePassemiers/celfie
cfDNA cell type of origin estimation
AntoinePassemiers/ChIP-seq-Peak-Caller
Peak Calling algorithm for Chromatin-immunoprecipitation sequencing (ChIP-seq) data
AntoinePassemiers/Feature-Selection-Benchmark
Official source code for the paper "How good are neural network feature selection methods in detecting non-linear signals? A quantitative benchmark."
AntoinePassemiers/GRADIS
Assessing the robustness of the results presented in "Supervised learning of gene regulatory networks based on graph distance profile of transcriptomics data"
AntoinePassemiers/Jerry-The-Race-Car-Driver
He drives so goddamn fast!