COVID-19 Epi Dashboard
The goal of this dashboard is to provide an epidemiological overview of the COVID-19 pandemic, incorporating data from multiple sources.
It is being actively developed by the data science team at Epicentre MSF.
The tool is built using the R programming language and the shiny web framework. Packages used include the tidyverse, leaflet and highcharter.
Setup Data
To set up data for the app, source data-raw/data.R and data-raw/shapefiles.R.
Development
The primary shiny code can be found in the R/mod_map.R module.
Run in dev mode
To run the application, source dev/run_dev.R
Current data sources
European Centre for Disease Prevention and Control
Data on the geographic distribution of COVID-19 cases worldwide
Center for Systems Science and Engineering (CSSE) at Johns Hopkins University (JHU)
Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE