TheHumanPangenome -- Creation of and Toolsets for Human Pangenomic Analysis The path of GRCh38 through a graph! For details check the DS folder! A Faster, Better Short-Read Mapper with Hit Chaining. Now with more corn! See the Giraffe folder for details! Most Genome Annotations can be Imported from gff3 (to ggff!) quite easily! See the annotation folder for details! Allele-Specific Expression can be calculated in a lightweight fashion! Grab the workflow in the RNA folder! Calculate Mutations In, Outside of, and at Breakpoints of Structural Variants! See the SV folder for Details! We Mapped the MHC Region of HG002 to a Graph with Long Reads, Long Reads, 10X and love. Check out the MHC folder!