ArsenaultResearch
Postdoctoral Researcher in Buck Trible's Lab at Harvard University studying supergenes and their effect on complex phenotypes in ants.
Harvard UniversityCambridge, MA, USA
Pinned Repositories
al-folio
A beautiful, simple, clean, and responsive Jekyll theme for academics
Arsenault-King-Simple-Inheritance
Repository containing the bioinformatic analyses performed for the manuscript "Simple inheritance, complex regulation: supergene-mediated fire ant queen polymorphism"
Arsenault_RibaGrognuz_Direct_Indirect_Effect
Repository containing the bioinformatic analyses performed for the manuscript "Direct and indirect effects of a social supergene"
ArsenaultResearch.github.io
Personal Website for Sam Arsenault based on the al-folio template
ASE-pipeline
Snakemake pipeline for generating variant based counts files from aligned reads
findZX
Fork of the main branch to modify for updated FASRC cluster
RNAseq_Pipeline
Test pipeline for performing RNA-seq analysis with STAR from raw reads to counts files.
Shell-Packages
Pipelines for various analyses
snakemake-workflow-template
A template for standard compliant snakemake-workflows
snpArcher
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
ArsenaultResearch's Repositories
ArsenaultResearch/ArsenaultResearch.github.io
Personal Website for Sam Arsenault based on the al-folio template
ArsenaultResearch/snakemake-workflow-template
A template for standard compliant snakemake-workflows
ArsenaultResearch/al-folio
A beautiful, simple, clean, and responsive Jekyll theme for academics
ArsenaultResearch/Arsenault-King-Simple-Inheritance
Repository containing the bioinformatic analyses performed for the manuscript "Simple inheritance, complex regulation: supergene-mediated fire ant queen polymorphism"
ArsenaultResearch/Arsenault_RibaGrognuz_Direct_Indirect_Effect
Repository containing the bioinformatic analyses performed for the manuscript "Direct and indirect effects of a social supergene"
ArsenaultResearch/ASE-pipeline
Snakemake pipeline for generating variant based counts files from aligned reads
ArsenaultResearch/findZX
Fork of the main branch to modify for updated FASRC cluster
ArsenaultResearch/RNAseq_Pipeline
Test pipeline for performing RNA-seq analysis with STAR from raw reads to counts files.
ArsenaultResearch/Shell-Packages
Pipelines for various analyses
ArsenaultResearch/snpArcher
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
ArsenaultResearch/windowRAxMLng
Generate a series of windowed phylogenies with associated metrics based on a .vcf input