Pinned Repositories
AGAT
Another Gff Analysis Toolkit
alvis-intro
Introduction slides for Alvis
avataaars-generator
Simple generator React app for avataaars
BESST
BESST - scaffolder for genomic assemblies
bioseq-js
For live demo, see http://lh3lh3.users.sourceforge.net/bioseq.shtml
charty-party-webapp
Simple webapp to play Charty Party together remotely in the time of coronavirus.
conda_r_skeleton_helper
Cleaning up Conda r-packages
Cookiecutter
CSN.r
Attempt to convert https://github.com/wys8c764/CSN from Matlab to R
data-science-at-the-command-line
Data Science at the Command Line
AskPascal's Repositories
AskPascal/AGAT
Another Gff Analysis Toolkit
AskPascal/alvis-intro
Introduction slides for Alvis
AskPascal/avataaars-generator
Simple generator React app for avataaars
AskPascal/charty-party-webapp
Simple webapp to play Charty Party together remotely in the time of coronavirus.
AskPascal/conda_r_skeleton_helper
Cleaning up Conda r-packages
AskPascal/Cookiecutter
AskPascal/CSN.r
Attempt to convert https://github.com/wys8c764/CSN from Matlab to R
AskPascal/pp-cr-testing
Testing CI on Coderefinery Workshop
AskPascal/Docker
AskPascal/docker-munin-server
Dockerization of a munin server behind nginx
AskPascal/fake-cam
A Python app and Docker image for webcam stream manipulation
AskPascal/forking-workflow-exercise
AskPascal/GenePy
GenePy v1.2 a score for the analysis of next generation sequencing data
AskPascal/GHCI_test
Testing environment for github actions / workflows / CI
AskPascal/git-aware-prompt
Display current Git branch name and stats in your terminal prompt when in a Git working directory.
AskPascal/gwas
Scripts for GWAS association and metaanalysis
AskPascal/home
settings
AskPascal/hubot-slack-github-issues
Hubot script using the Slack Real Time Messaging and Web APIs to file GitHub issues
AskPascal/progressr
三 R package: An Inclusive, Unifying API for Progress Updates
AskPascal/pySCENIC
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
AskPascal/rnaseq
RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
AskPascal/singularity
Singularity receipts
AskPascal/snakefmt
The uncompromising Snakemake code formatter
AskPascal/snakeparse
Making Snakemake workflows into full-fledged command line tools since 1999.
AskPascal/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
AskPascal/svg_stack
concatenate SVG files
AskPascal/testing
Lesson on automated testing.
AskPascal/testpy_cl
AskPascal/webr_playground
Testing WebR
AskPascal/workshop-biostatistics