Pinned Repositories
cbioportal
disambiguate
Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem
exac_browser
Browser for ExAC consortium data
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
NGS_Utils
Utility functions for bioinformatics projects
reference_data
Reference data: BED files, genes, transcripts, variations.
Seq2C
simple_sv_annotation
Simplify snpEff annotations for interesting cases
VarDict
VarDict
VarDictJava
VarDict Java port
AstraZeneca - NGS Team's Repositories
AstraZeneca-NGS/VarDict
VarDict
AstraZeneca-NGS/VarDictJava
VarDict Java port
AstraZeneca-NGS/reference_data
Reference data: BED files, genes, transcripts, variations.
AstraZeneca-NGS/disambiguate
Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem
AstraZeneca-NGS/simple_sv_annotation
Simplify snpEff annotations for interesting cases
AstraZeneca-NGS/Seq2C
AstraZeneca-NGS/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
AstraZeneca-NGS/cbioportal
AstraZeneca-NGS/exac_browser
Browser for ExAC consortium data
AstraZeneca-NGS/NGS_Utils
Utility functions for bioinformatics projects
AstraZeneca-NGS/ichorCNA
Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
AstraZeneca-NGS/MultiQC_Clarity
MultiQC plugin interacting with the Illumina Genologics Clarity LIMS
AstraZeneca-NGS/rnaseq-nf
AstraZeneca-NGS/sambamba
Tools for working with SAM/BAM data
AstraZeneca-NGS/TargQC
Alignment coverage analysis tool