AudeCaizergues

PhD in Evolutionary Ecology 🐦. Investigating how urbanization affects species evolution. Postdoc at University of Toronto Mississauga. ☘️

Pinned Repositories

AudeCaizergues.github.io
Github Personal Page
Language:JavaScript00
Degeneracy_gt
Extracting 4folds and 0folds positions from reference genome
Language:Python00
Epigenetics_and_the_city
This repository contains the scripts used for the analyses in "Epigenetics and the city: non-parallel DNA methylation modifications across pairs of urban-rural Great tit populations. " Caizergues et al. 2022 Evolutionary Applications
Language:R00
glue_demography
GLUE_DEMOGRAPHY: Global Urban Evolution Project — Demography
Language:Jupyter Notebook00
Malaria_Great_Tits
Language:R00
pyslim
Tools for dealing with tree sequences coming to and from SLiM.
Language:Python2723
fastDFE
Fast and flexible inference of the distribution of fitness effects (DFE), VCF-SFS parsing with ancestral allele and site-degeneracy annotation.
Language:Python110

AudeCaizergues/Malaria_Great_Tits
Language:R
AudeCaizergues/glue_demography
GLUE_DEMOGRAPHY: Global Urban Evolution Project — Demography
Language:Jupyter Notebook
AudeCaizergues/AudeCaizergues.github.io
Github Personal Page
Language:JavaScript
AudeCaizergues/Degeneracy_gt
Extracting 4folds and 0folds positions from reference genome
Language:Python
AudeCaizergues/Epigenetics_and_the_city
This repository contains the scripts used for the analyses in "Epigenetics and the city: non-parallel DNA methylation modifications across pairs of urban-rural Great tit populations. " Caizergues et al. 2022 Evolutionary Applications
Language:R