BBillot/SynthSeg

Force resampling

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Is there a way to force resampling to 1-mm isotropic resolution, even if the resolution is close to 1-mm isotropic and resampling is skipped internally?
Also, is the output resampled image bias corrected in any way?

Thanks!

Ohlala, I'm so sorry, this question completely escaped my attention!

So the resampled image are NOT corrected for bias, because SynthSeg has been trained to handle bias-corrupted images.

Then if you wish to ALWAYS resample images at 1mm isotropic, you can simply replace L449 of SynthSeg/predict_synthseg.py (here) by:

if True:

Hope this helps and sorry again for the late answer,
Benjamin