BCCHR-trainee-omics-group/StudyGroup

This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.

Welcome to the Trainee 'Omics Group's (TOG) GitHub!

TOG is the resident data analysis and bioinformatics trainee support group at the British Columbia Children’s Hospital Research Institute, and we host workshops and seminars focused on the analysis methodologies used in biomedical healthcare research.

Here, you'll find all of the scripts from our workshops!

Get in touch!

Website
Email
TOG Community Slack
Mailing List Signup
Previous Workshop Recordings

Are you looking to connect and collaborate with other labs and/or trainees for some data-specific expertise?
Email us, and we'll get you in touch with the right people from within our vast UBC-wide network!

Workshops

Our Worskhop recordings are available on our website!

Statistics

• Most Commonly Used Statistical Tests in Healthcare Research using R

R/RStudio and Version Control

• What is R?
• Introduction to R markdown
• R - Not So Scary!
• Intro to Git/Github
• Writing your Thesis using RMarkdown

Data Cleanup and Vizualisation

• Introduction to Data Manipulation and Data Wrangling.
• Introduction to plotting in R using ggplot2
• Heatmaps and PCA

Analysis

• Intro to EWAS
• Gene Ontology Enrichment
• RNA-seq Analysis
• Multi-omic integration with SMITE

Science Communication

• Graphic Design for Science Communication

Upcoming Workshops

Register here

Workshop Name	Date	Time	Location	Lead
Utilization of public GEO data in R	23 February 2024	1:00 - 2:30 PM PST	Hybrid	Jiyoung Han

Upcoming Seminars

Talk Tile	Date	Time	Location	Speaker

Databinge

Databinge Information

Databinge Flyer

TOG has now partenerd with UBC's Dynamic Brain Circuits' (DBC) Databinge initiative to bring all our TOG Community members increased health data analytics support! Each session includes a themed discussion, along with concurrent data support. When: Every Friday, from 12:30 - 1:30 PM. There is no need to register, everyone is welcome! Rotating Themed Discussion Topics: Fluorescence Microscopy, Tissue Clearing and Expansion Planning Experiments, Effect Sizes, and Power Calculations Machine Learning, Computer Vision, and Data Analysis Human Neuroimaging, EEG, and Brain Stimulation Omics and Sequencing Data and Analysis Choice of Coding Languages for Beginners Drop-in Help for each session: Any and all data! July 15 2022, Friday: Themed discussion topic - Human Neuroimaging, EEG, and Brain Stimulation

$100 TOG Seminar Award Draw

Award Information	Award Flyer
You are invited to a $100 award draw for speakers that present their work at the TOG seminar series. Please, find attached the announcement poster and a quick survey to help us serve you better.