BJWiley233/FAST_

fast

from https://github.com/bowman-lab/fast

• updated logging messages for subprocess
• placed a sleeper or submitting GROMACS jobs on LSF since they always schedule on same device if you submit all at once
• will post example of driver script for using ResiduePockets class for MSM
• test changes plus update final build_msm.py and a .ipynb