NGS Quality Control

Bioinformatics Training Platform (BTP) Module: NGS Quality Control

Topic
- NGS Quality Control
Target Audience
- Biologists
- Non-bioinformaticians
- Little to no programming expereience
Prerequisites
- None
Key Learning Outcomes
- Assess the overall quality of NGS (FastQ format) sequence reads
- Visualise the quality, and other associated matrices, of reads to decide on filters and cutoffs for cleaning up data ready for downstream analysis
- Clean up adaptors and pre-process the sequence data for further analysis
Time Required
- 2 hrs

License

The contents of this repository are released under the Creative Commons Attribution 3.0 Unported License. For a summary of what this means, please see: http://creativecommons.org/licenses/by/3.0/deed.en_GB