Pinned Repositories
book-chapter-uhf-neuro-mri
Educational Code related to book chapter 24 of "Ultra High Field Neuro MRI" - BOLD fMRI: Physiology and Acquisition strategies
bto_mri_protocols_info
This is a repository of wiki, code and containers for post-processing data acquired using the BRAIN-TO imaging protocols on a Siemens Prisma 3 T
CapsNet
Deep fMRI Encoding Models of Human Vision using Capsule Networks
cubric-physio
Physiological Noise Correction using the PhysIO Toolbox - Examples for CUBRIC, Cardiff
girfISMRM2022
Demonstration code for the GIRF abstract for ISMRM 2022
GIRFReco.jl
An Open-Source End-to-End Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia
MP2RAGE-utils
User-friendly MP2RAGE scripts with a single YAML input.
MRIGradients.jl
Julia version of MRI gradient descriptions and GIRF applications.
MRIRecipes.jl
PDCM
Matlab Codes for PDCM
Brain Research in Advanced Imaging and Neuromodeling - Toronto's Repositories
BRAIN-TO/GIRFReco.jl
An Open-Source End-to-End Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia
BRAIN-TO/girfISMRM2022
Demonstration code for the GIRF abstract for ISMRM 2022
BRAIN-TO/CapsNet
Deep fMRI Encoding Models of Human Vision using Capsule Networks
BRAIN-TO/PDCM
Matlab Codes for PDCM
BRAIN-TO/MRIGradients.jl
Julia version of MRI gradient descriptions and GIRF applications.
BRAIN-TO/MRIRecipes.jl
BRAIN-TO/bto_mri_protocols_info
This is a repository of wiki, code and containers for post-processing data acquired using the BRAIN-TO imaging protocols on a Siemens Prisma 3 T
BRAIN-TO/cubric-physio
Physiological Noise Correction using the PhysIO Toolbox - Examples for CUBRIC, Cardiff
BRAIN-TO/MP2RAGE-utils
User-friendly MP2RAGE scripts with a single YAML input.
BRAIN-TO/book-chapter-uhf-neuro-mri
Educational Code related to book chapter 24 of "Ultra High Field Neuro MRI" - BOLD fMRI: Physiology and Acquisition strategies
BRAIN-TO/MIRT.jl
MIRT: Michigan Image Reconstruction Toolbox (Julia version)
BRAIN-TO/presurfer
Scripts to prepare MP2RAGE for Freesurfer
BRAIN-TO/rrsg_challenge_01
Consolidation of code from the RRSG challenge to reproduce Pruessmann's Non-Cartesian SENSE paper
BRAIN-TO/xnat_utilities
Code base for XNAT applications
BRAIN-TO/boldreams
BRAIN-TO/FaceOff
ANTs-based commandline utilities for (1) consistent, super-fast defacing of anatomical MRI images (2) dielectric pad masking
BRAIN-TO/gitdemo
Git demonstration for BRAIN-To group
BRAIN-TO/h4h_cluster_info
Updated documentation about accessing the h4h cluster - Authored by Mia Mojica and Ariana Besik
BRAIN-TO/misc_scripts
Repository for scripts that are too small for their own repo, but useful enough for sharing.
BRAIN-TO/MRIReco.jl
Julia Package for MRI Reconstruction
BRAIN-TO/QSMxT
BRAIN-TO/VAE-GAN-CelebA
Code and notebooks related to the paper: "Reconstructing Faces from fMRI Patterns using Deep Generative Neural Networks" by VanRullen & Reddy, 2019