/OpenElis

Fork of OpenELIS for managing Lab workflows (Tests, Results, Samples, etc).

Primary LanguageJavaOtherNOASSERTION

OpenElis

Build and Publish OpenELIS

Build and Publish OpenELIS Demo DB

Build and Publish OpenELIS Fresh DB

forked from OpenElis_v3.1_r2013_02_21 branch in svn

Requirements to build OpeneLIS

  • java version <= "1.7"
  • ant version <= "1.9.1"
  • ruby version <= "2.2" and gem install compass

To build OpenElis run

  • ant dist Creates OpenELIS War
  • ant setupDB test test-only dist Creates clinlims database in postgres, runs tests, and then creates OpenELIS War
  • ./scripts/vagrant-deploy.sh Create OpenELIS War and deploys it to your vagrant's tomcat
  • ./scripts/vagrant-database.sh Runs Liquibase migration script in your vagrant

Bahmni OpenELIS (bahmni-lab) docker image

Docker images for OpenELIS and it's database are built using Github Actions.

Resources to build the following docker images can be found in the package directory.

  1. bahmni/openelis
  2. bahmni/openelis-db:fresh
  3. bahmni/openelis-db:demo

Transifex Configuration

Transifex is a web based translation platform where one can do the translations and can be pulled into the codebase. Link to setup the Transifex Client

  • tx pull -a downloads the property files

For more information please refer this link

Technical issues with the codebase

  • Transaction and Hibernate session management
  • Pagination handled via HttpSession
  • Code duplication in various places (need examples here)
    • ResultValidationPaging, ResultsPaging and AnalyzerResultsPaging. Same copy-pasted code with very minor difference.

Functional changes made by us

  • The order should contain the panel along with the tests. Hence making panel more than convenience tool for selecting multiple tests.

  • AtomFeed based integration with OpenMRS and OpenERP

  • REST endpoint for Patient, LabResults

  • Added functionality to validate test results by a particular accession number. Also you can see items to be validated across all test sections.

Technical improvements

  • Added ant buld
  • Shortcircuited all calls to Session.clear