Bayer-Group/pado

Issues

• Migrate to pydantic v2

  #28 opened 9 months ago by wolny
  1

• Cannot create pado dataset from open tg-gates

  #26 opened 9 months ago by wolny
  5

• Cannot create mock dataset

  #27 opened 9 months ago by wolny
  2

• `ImageId` class has incompatibility with pytorch-lighting utilities

  #25 opened 9 months ago by ap--
  0

• TileStrategy

  #23 opened 9 months ago by marcomulinex
  2

• Compatibility of TileDataset with Dataloder

  #24 opened 9 months ago by marcomulinex
  3

• `ImageProvider` version 2: serialize to kerchunk

  #20 opened 2 years ago by ap--
  0

• Command line options to easily create datasets

  #19 opened 2 years ago by ap--
  0

• Maybe change `PadoDataset.__getitem__` exceptions

  #18 opened 2 years ago by ap--
  0

• Provide entrypoints for `pado_<mydata>` dataset modules

  #17 opened 2 years ago by ap--
  0

• Allow combining providers

  #16 opened 2 years ago by ap--
  0

• Support client-side coloring thresholding for `ImagePredictions`

  #15 opened 2 years ago by ap--
  0

• Provide versioning for ImagePredictions

  #14 opened 2 years ago by ap--
  0

• Support transparency in `ImagePredictionsWriter`

  #13 opened 2 years ago by ap--
  0

• Make `PadoItem` attributes lazy

  #12 opened 2 years ago by ap--
  0

• `PadoDataset.ingest_obj` errors if same identifier

  #11 opened 2 years ago by ap--
  0

• Provide helpers to enforce local data

  #10 opened 2 years ago by ap--
  0

• Add specialized copying routines

  #9 opened 2 years ago by ap--
  0

• Command line browser for dataset contents

  #8 opened 2 years ago by ap--
  0

• Improve annotation handling code

  #7 opened 2 years ago by ap--
  0

• Provide webdataset interface (drop-in behavior)

  #6 opened 2 years ago by ap--
  0

• Convert PadoDatasets to/from QuPath projects

  #5 opened 2 years ago by ap--
  0

• Provide an anonymizable read-only view

  #4 opened 2 years ago by ap--
  1