/string-dissimilarity-in-python

Primary LanguagePython

string-dissimilarity-in-python

Repository for the Medium article of the same name.

Download data

Download the sample data, consisting of T-cell receptor sequences obtained from VDJdb

pip install gdown
gdown https://drive.google.com/uc?id=1d5DQLQ1ibkuAPlEe-TJs3uZLJGkLPohA -O data/vdjdb.csv

Run the experiments

It is assumed that docker is installed and running:

./run_experiments.sh