Pinned Repositories
AnnotationDatabase
annotation database for human genetics, genomics and epigenomics
Applied-Deep-Learning
Applied Deep Learning
BenxiaHu.github.io
bioinfo-training_additional-tutorial
brain-cell-type-peak-files
H3K27ac ChIPseq, H3K4me3 ChIPseq, ATACseq peak files for neurons, microglia, oligodendrocytes and astrocytes
cross-disorder
cross disorder revision
dapars
DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)
Deep_learning_examples
Examples of using deep learning in Bioinformatics
DLR_ICF
MutSeq
BenxiaHu's Repositories
BenxiaHu/DLR_ICF
BenxiaHu/MutSeq
BenxiaHu/AnnotationDatabase
annotation database for human genetics, genomics and epigenomics
BenxiaHu/Applied-Deep-Learning
Applied Deep Learning
BenxiaHu/BenxiaHu.github.io
BenxiaHu/brain-cell-type-peak-files
H3K27ac ChIPseq, H3K4me3 ChIPseq, ATACseq peak files for neurons, microglia, oligodendrocytes and astrocytes
BenxiaHu/dapars
DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)
BenxiaHu/Deep_learning_examples
Examples of using deep learning in Bioinformatics
BenxiaHu/DeepSilencer
A deep convolutional neural network for the accurate prediction of silencers
BenxiaHu/DeepLearning
BenxiaHu/DeepSTARR
Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Drosophila melanogaster S2 cells
BenxiaHu/DNAsplot
BenxiaHu/DoubletFinder
R package for detecting doublets in single-cell RNA sequencing data
BenxiaHu/epiformer
BenxiaHu/ExpreLev
BenxiaHu/FullMatrix
BenxiaHu/gencode_regions
Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files
BenxiaHu/HiBrowser
BenxiaHu/Human_Mouse_geneAlias
BenxiaHu/ldsc-1
LD Score Regression (LDSC)
BenxiaHu/MMQTL
MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control for population structure and relatedness
BenxiaHu/motifBreakR
A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
BenxiaHu/NeuN
BenxiaHu/peakAnno
BenxiaHu/ROSE
ROSE: RANK ORDERING OF SUPER-ENHANCERS
BenxiaHu/scHiCluster
BenxiaHu/SilencerEnhancerPredict
BenxiaHu/SnapATAC
Analysis Pipeline for Single Cell ATAC-seq
BenxiaHu/TransEPI
Enhancer-promoter interaction model
BenxiaHu/TU_filter
A local TU annotation tool for multi-sample comparison