BiAPoL/napari-clusters-plotter

Issues

• Standardize frame axis position for timelapse

  #220 opened 2 years ago
  5

• Automatically update "Clustering" selection box

  #217 opened 2 years ago
  0

• Hiding non-selected clusters checkbox bug

  #216 opened 2 years ago
  0

• Remove pinned numpy version when the problem is fixed (UMAP not working with Numpy>1.23.5)

  #215 opened 2 years ago
  2

• Add min_dist parameter field for UMAP

  #213 opened 2 years ago
  0

• Feature request: support for MultiScaleData

  #212 opened 2 years ago
  6

• Make sure that ncp works with "Frame" and "frame" columns

  #211 opened 2 years ago
  1

• Add any feature as color to the visualization

  #209 opened 2 years ago
  0

• Change tick label color

  #206 opened 2 years ago
  1

• Hide non-selected only works for manual selections

  #204 opened 2 years ago
  0

• Make current timepoint's highlighting reflect cluster's color

  #200 opened 2 years ago
  1

• Call plotter from external plugin

  #198 opened 2 years ago
  4

• Use 2D histogram lasso selector for big datasets

  #195 opened 2 years ago
  5

• Label unselected datapoints as background/noise

  #192 opened 2 years ago
  0

• Allow usage of sub samples for Measurment -> Plot

  #191 opened 2 years ago
  2

• Add options to modify plots

  #190 opened 2 years ago
  3

• Multiple extension for Measurement -> Plot Measurement / load from csv

  #189 opened 2 years ago
  10

• Display tracking features

  #186 opened 2 years ago
  0

• Plot axes labels not visible

  #182 opened 2 years ago
  0

• Make plotting work programmatically.

  #181 opened 2 years ago
  2

• Simplify `button()` and `title()` Qt code

  #180 opened 2 years ago
  2

• Make widgets available via public API

  #178 opened 2 years ago
  4

• Axis pulldowns are empty when starting the PlotterWidget

  #177 opened 2 years ago
  0

• Matplotlib 3.7.0 incompatible

  #176 opened 2 years ago
  2

• Exchange Qt code file with a file from Qt Designer

  #175 opened 2 years ago
  6

• Napari crashes when calling dimensionality reduction from notebook

  #169 opened 2 years ago
  4

• moved menus - update documentation

  #164 opened 2 years ago
  1

• feature request: overlay data of labels layers of several datasets

  #161 opened 2 years ago
  4

• Visibility of data points suboptimal

  #159 opened 2 years ago
  1

• Implement a technique to explain non-linear dimensionality reduction results

  #158 opened 2 years ago
  0

• Implement a check to avoid incorrect visualisation without a warning

  #157 opened 2 years ago
  1

• Initial automatic detection of label layer properties does not work if napari is opened from the notebook

  #153 opened 2 years ago
  1

• Histograms

  #151 opened 2 years ago
  0

• Reactivate napari hub preview page

  #149 opened 2 years ago
  0

• Implement plotting as heatmaps

  #148 opened 2 years ago
  6

• HUMAP

  #144 opened 2 years ago
  1

• Error when using HDBSCAN

  #138 opened 2 years ago
  4

• `Plot measurements` should be in the Visualization menu in the tools

  #137 opened 2 years ago
  2

• Remove joblib constraint

  #135 opened 2 years ago
  0

• Cluster IDs in space is incorrent/current frame is not highlighted for a timelapse in version 0.5.2

  #131 opened 2 years ago
  4

• Python 3.10 compatibility

  #126 opened 2 years ago
  1

• Scale mismatch between label layer and highlighted/selected cluster

  #120 opened 2 years ago
  1

• Add CITATION.cff file

  #119 opened 2 years ago
  1

• Feature Request: Use other layer types

  #118 opened a year ago
  3

• Selection is reset in measurements-list

  #114 opened 2 years ago
  1

• Fix dimension reduction tests

  #110 opened 2 years ago
  1

• Select the number of UMAP dimensions

  #107 opened 2 years ago
  0

• Split objects belonging to the same classes into separate layers

  #104 opened 3 years ago
  0

• Use clusters-plotter on points data

  #103 opened a year ago
  1

• Improve Code Coverage

  #98 opened 2 years ago
  0