BiAPoL/napari-clusters-plotter

Issues

• Meta layer navigation widget?

  #331 opened 6 months ago by jo-mueller
  6

• Do clustering across layers

  #275 opened 4 months ago by jo-mueller
  3

• Make ncp npe2 compatible

  #276 opened 4 months ago by jo-mueller
  1

• Re-structure Plotter code

  #317 opened 8 months ago by zoccoler
  1

• Avoid using Labels.color

  #307 opened 5 months ago by zoccoler
  4

• Tests failing on main

  #335 opened 5 months ago by zoccoler
  1

• Manual Histogram Bin Selection not Working

  #320 opened 5 months ago by zoccoler
  0

• Support new metadata

  #330 opened 5 months ago by jo-mueller
  1

• Process timelapse data

  #329 opened 6 months ago by jo-mueller
  0

• Remove HDBSCAN dependency

  #324 opened 7 months ago by jo-mueller
  0

• v0.8.0 not conda installable yet

  #323 opened 7 months ago by zoccoler
  3

• Allow U-Map to run in parallel to increase performance

  #273 opened 7 months ago by stefanhahmann
  2

• Decide/document if current version is backwards compatible to 0.7.3

  #303 opened 7 months ago by haesleinhuepf
  1

• Test Failing due to make_napari_viewer

  #277 opened 7 months ago by Cryaaa
  2

• Cluster widget puts results in `properties`

  #322 opened 7 months ago by jo-mueller
  1

• New release 0.8.0

  #281 opened 7 months ago by zoccoler
  24

• Histogram 1D Manual Selection Not Working

  #321 opened 7 months ago by zoccoler
  0

• Test current version before releasing

  #302 opened 8 months ago by haesleinhuepf
  3

• Cannot select points layer

  #314 opened 9 months ago by rhornb
  4

• Supported layer types in documentation

  #301 opened 9 months ago by haesleinhuepf
  5

• Set up automatic release on PyPi

  #299 opened 9 months ago by jo-mueller
  7

• Zoom is reset after selection of cluster

  #297 opened a year ago by thorstenwagner
  0

• [pre-]selected layer is an image layer with no properties

  #295 opened a year ago by haesleinhuepf
  1

• RuntimeError when manually selecting cluster (still works though)

  #279 opened a year ago by zoccoler
  0

• Deselect clusters when control is pressed

  #289 opened a year ago by thorstenwagner
  0

• clusters plotter is incompatible with pytorch on windows because of 'control' library

  #248 opened a year ago by haesleinhuepf
  3

• Update dependencies

  #268 opened a year ago by goanpeca
  1

• Authorship

  #246 opened a year ago by haesleinhuepf
  2

• TypeError: 'numpy.float64' object cannot be interpreted as an integer

  #260 opened a year ago by Nal44
  3

• Performance of cluster plotter with large datasets and timelapse data

  #272 opened a year ago by stefanhahmann
  0

• Label image disappears when performing clustering

  #271 opened a year ago by stefanhahmann
  0

• Label image disappears when performing clustering on timelapse data

  #269 opened a year ago by stefanhahmann
  3

• Cluster Widget: add more tool to realize a selection cluster

  #267 opened a year ago by Erwan67
  0

• Create circular manual selection

  #266 opened a year ago by zoccoler
  0

• HDBSCAN throwing TypeError

  #263 opened a year ago by zoccoler
  5

• Cluster plotter does not work with napari 0.4.18

  #258 opened a year ago by thorstenwagner
  3

• UMAP does not work if table contains `inf` values

  #262 opened a year ago by zoccoler
  1

• Plotter with marginal distributions / histograms

  #261 opened a year ago by zoccoler
  0

• fast hdbscan

  #250 opened 2 years ago by haesleinhuepf
  4

• Resetting zoom after selection of manual clustering

  #251 opened 2 years ago by thorstenwagner
  2

• Add me as developer

  #253 opened 2 years ago by thorstenwagner
  2

• Labels layer opacity = 0

  #247 opened 2 years ago by haesleinhuepf
  2

• Change categorical color palette for 2D histogram that do not overlap with chosen colormap

  #222 opened 2 years ago by zoccoler
  1

• Expose `frame_changed` method ?

  #242 opened 2 years ago by zoccoler
  3

• Add option to select colormaps other than 'magma' for the 2D histogram

  #225 opened 2 years ago by zoccoler
  0

• Add option to avoid always overwriting dimensionality reduction results

  #224 opened 2 years ago by zoccoler
  0

• Re-enable tests on Windows

  #232 opened 2 years ago by lazigu
  0

• Clustering is not reset when clicked anywhere in the plot if "hide non-selected" box is not checked

  #228 opened 2 years ago by lazigu
  0

• Add option to select other number of bins methods

  #223 opened 2 years ago by zoccoler
  0

• Add auto-update checkbox option

  #226 opened 2 years ago by zoccoler
  0