BigDataBiology/AMPSphereWebsite

Issues

• Change microbial sources filter to adopt gtDB taxonomic classification tree

  #33 opened 3 years ago by AdeBC
  5

• Current example search leads to no results and bad message

  #42 opened 3 years ago by luispedro
  1

• HMM logos should be SVG

  #37 opened 3 years ago by luispedro
  2

• Show HMM logo for each family (if available)

  #38 opened 3 years ago by luispedro
  3

• Cropped HMM logos?

  #36 opened 3 years ago by luispedro
  0

• Optimize the performance of the frontend

  #6 opened 3 years ago by AdeBC
  0

• Possible features for the future

  #4 opened 3 years ago by AdeBC
  0

• Migrate all components to adopt Quasar

  #20 opened 3 years ago by AdeBC
  1

• Introduce Quasar through CDN

  #32 opened 3 years ago by AdeBC
  0

• Better results page when there are zero hits

  #40 opened 3 years ago by luispedro
  0

• Download sequences for the small families

  #35 opened 3 years ago by luispedro
  0

• Redraw feature graphs on AMP page

  #15 opened 3 years ago by AdeBC
  0

• Color matching issue

  #11 opened 3 years ago by AdeBC
  1

• Make the website more official

  #14 opened 3 years ago by AdeBC
  1

• Download CSV in Browser page leads to unnecessary large file

  #41 opened 3 years ago by celiosantosjr
  1

• The WIP note accumulates counter everytime you go to home

  #39 opened 3 years ago by luispedro
  0

• Sequence downloads not working

  #34 opened 3 years ago by luispedro
  1

• Optimize text search performance

  #12 opened 3 years ago by AdeBC
  4

• HTTPS for the backend

  #28 opened 3 years ago by AdeBC
  1

• New layout without text search bar

  #29 opened 3 years ago by AdeBC
  0

• Quality badges for each AMP

  #13 opened 3 years ago by AdeBC
  1

• change graphs of features to include dots for the family and for the entire AMPSphere (compare the AMP with its own family and the resource)

  #24 opened 3 years ago by celiosantosjr
  0

• Calling it "host" may be a bit confusing: the microbe is the host of the AMP as well. Also, some of the AMPs do not have a host

  #21 opened 3 years ago by celiosantosjr
  0

• add a short help for each variable

  #23 opened 3 years ago by celiosantosjr
  0

• Empty geo, host and habitat distribution for AMPs without associated Metagenomes

  #18 opened 3 years ago by AdeBC
  2

• add consensus sequence

  #22 opened 3 years ago by celiosantosjr
  0

• presentation

  #16 opened 3 years ago by celiosantosjr
  1

• Enhance layout responsiveness

  #9 opened 3 years ago by AdeBC
  2

• Why not always perform both "MMSeqs" & "HMM" searches?

  #19 opened 3 years ago by luispedro
  1

• Independent probabilities of helix, turn and sheet.

  #17 opened 3 years ago by AdeBC
  1

• Page info doesn't follow filter criterias

  #8 opened 3 years ago by AdeBC
  0

• Todos & progress for the development

  #3 opened 3 years ago by AdeBC
  8

• Support pagination on each search result page

  #10 opened 3 years ago by AdeBC
  0

• Accelerate statistics API by having a statistics results table in the database

  #7 opened 3 years ago by AdeBC
  0

• Accelerate mmseqs search by creating database and index in advance.

  #5 opened 3 years ago by AdeBC
  0

• Todos for demo website

  #1 opened 3 years ago by AdeBC
  1