BigDataBiology/Duan2024__GMSCv1_Construction_And_Analysis

Issues

• Add quality labels to entities (genes, amps, families).

  #13 opened a year ago by AdeBC
  1

• Run all peptides against a larger protein DB (eg, eggNOG)

  #12 opened a year ago by luispedro
  4

• Define levels of quality for smORFs

  #3 opened a year ago by luispedro
  3

• Generate frozen versions of the files

  #11 opened a year ago by luispedro
  1

• Create a website for the resource

  #4 opened a year ago by luispedro
  1

• Looking for hits in meta-proteomics data

  #8 opened 3 years ago by luispedro
  1

• Looking for hits in meta-transcriptome data

  #7 opened 3 years ago by luispedro
  0

• Run a spurious ORF detection tool like antiFAM/Spurio

  #5 opened 3 years ago by luispedro
  2

• Checking for smORFs that only occur close to the start of contigs

  #2 opened 3 years ago by luispedro
  0

• Send Elisa Venturini hits for her proteins

  #6 opened 3 years ago by luispedro
  0

• Transferring habitat from samples to smORFs/families

  #10 opened 3 years ago by luispedro
  1

• Taxonomic annotation

  #9 opened 3 years ago by luispedro
  4

• Running RNACode on the catalog

  #1 opened 3 years ago by luispedro
  0