BioCogito

BioCogito's Stars

• Developer-Y/cs-video-courses

  List of Computer Science courses with video lectures.

  66k1.9k1349k

• jakevdp/PythonDataScienceHandbook

  Python Data Science Handbook: full text in Jupyter Notebooks

  Language:Jupyter Notebook42k1.8k19217.7k

• dennybritz/reinforcement-learning

  Implementation of Reinforcement Learning Algorithms. Python, OpenAI Gym, Tensorflow. Exercises and Solutions to accompany Sutton's Book and David Silver's course.

  Language:Jupyter Notebook20.2k8611556k

• flairNLP/flair

  A very simple framework for state-of-the-art Natural Language Processing (NLP)

  Language:Python13.7k2012.3k2.1k

• angrave/SystemProgramming

  Angrave's Crowd-Sourced System Programming Book used at UIUC

  5.5k3660769

• ml-tooling/ml-workspace

  🛠 All-in-one web-based IDE specialized for machine learning and data science.

  Language:Jupyter Notebook3.4k7294439

• stan-dev/stan

  Stan development repository. The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details.

  Language:C++2.6k1211.7k365

• mcanouil/awesome-quarto

  A curated list of Quarto talks, tools, examples & articles! Contributions welcome!

  1.6k61179112

• ropensci/drake

  An R-focused pipeline toolkit for reproducibility and high-performance computing

  Language:R1.3k341.1k128

• hse-aml/natural-language-processing

  Resources for "Natural Language Processing" Coursera course.

  Language:Jupyter Notebook1.2k60302k

• mikelove/awesome-multi-omics

  List of software packages for multi-omics analysis

  688536158

• 18F/technology-budgeting

  See https://derisking-guide.18f.gov/

  49233467

• Substra/substra

  Low-level Python library used to interact with a Substra network

  Language:Python26699534

• vaticle/biograkn

  BioGrakn Knowledge Graph

  180254552

• ropensci/rcrossref

  R client for various CrossRef APIs

  Language:R1652320321

• emreg00/toolbox

  Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)

  Language:Python10811458

• ueser/FIDDLE

  Flexible Integration of Data with Deep LEarning

  Language:Jupyter Notebook508611

• geneontology/go-site

  A collection of metadata, tools, and files associated with the Gene Ontology public web presence.

  Language:JavaScript434793389

• drisso/zinbwave

  Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave

  Language:R4286610

• Rothamsted/knetminer

  KnetMiner - webapp to search and visualize genome-scale knowledge graphs

  Language:JavaScript2516

• ncbi/cwl-ngs-workflows-cbb

  A set of CWL tools and workflows used by NCBI Computational Biology Branch for NGS data analysis

  Language:Common Workflow Language2411510

• pfgherardini/shiny-multiple-windows

  A simple shiny app that demonstrates the usage of a separate browser window for plotting

  Language:JavaScript10414

• tranSMART-Foundation/transmart-core

  Core components and documentation of the tranSMART platform.

  Language:JavaScript6222

• tetherless-world/biokg

  A probabilistic knowledge graph for exploring systems biology.

  Language:Python4822

• data2health/scits-platform

  Science of translational science research platform

  3430

• huizhanglab-jhu/OmicsOne

  2103

• solo7773/visnormsc

  A GUI tool normalizing single-cell RNA-seq data

  Language:Python20

• BioCogito/biocogito.github.io

  biocogito github site

  Language:HTML1100

• pfgherardini/superpose3D

  Superpose3D is a software for local comparison of protein structures that allows for user-defined structure representations

  Language:C++1100

• reactome-pwp/model

  Data model shared accross the widgets and browser

  Language:Java1304