BioPAX
BioPAX is a standard language that aims to enable integration, exchange, visualization and analysis of biological pathway data.
North America
Pinned Repositories
biopax
Core App: BioPAX support
BioPAX.github.io
BioPAX site
biopaxWebConsole
Online console for trying out BioPAX Paxtools Java API
pattern
Deprecated (- moving inside the Paxtools)
Paxtools
The BioPAX Object Model, API and utilities implemented in Java
paxtoolsr
The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) molecular interaction database
paxtoolsTutorial
specification
BioPAX specification and examples
validator
The BioPAX Validator
BioPAX's Repositories
BioPAX/Paxtools
The BioPAX Object Model, API and utilities implemented in Java
BioPAX/paxtoolsr
The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) molecular interaction database
BioPAX/BioPAX.github.io
BioPAX site
BioPAX/paxtoolsTutorial
BioPAX/specification
BioPAX specification and examples
BioPAX/validator
The BioPAX Validator
BioPAX/biopax
Core App: BioPAX support
BioPAX/pattern
Deprecated (- moving inside the Paxtools)
BioPAX/biopaxWebConsole
Online console for trying out BioPAX Paxtools Java API