Latest conda-forge release 0.2.7 instead of 0.2.8?
dominiquesydow opened this issue · 3 comments
Describe the bug
Hi!
Thank you for cutting a new release v0.2.8 on GH!
https://github.com/rasbt/biopandas/releases/tag/v0.2.8
As far as I understand, you also cut a new release on conda-forge
, right?
conda-forge/biopandas-feedstock#12
However, when installing biopandas
via conda-forge
I only retrieve version 0.2.7.
Could you please check if you run into the same issue?
Steps/Code to Reproduce
conda create -n biopandas biopandas
conda activate biopandas
conda list biopandas
Expected Results
biopandas
0.2.8 installation.
Actual Results
biopandas
0.2.7 installation.
# Name Version Build Channel
biopandas 0.2.7 pyh9f0ad1d_1 conda-forge
If I ask for 0.2.8 directly
conda install biopandas=0.2.8
I get
PackagesNotFoundError: The following packages are not available from current channels:
- biopandas=0.2.8
Current channels:
- https://conda.anaconda.org/conda-forge/linux-64
- https://conda.anaconda.org/conda-forge/noarch
- https://repo.anaconda.com/pkgs/main/linux-64
- https://repo.anaconda.com/pkgs/main/noarch
- https://repo.anaconda.com/pkgs/r/linux-64
- https://repo.anaconda.com/pkgs/r/noarch
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
Versions
>>> import biopandas; print("biopandas", biopandas.__version__)
biopandas 0.2.7
>>> import platform; print(platform.platform())
Linux-4.15.0-154-generic-x86_64-with-glibc2.10
>>> import sys; print("Python", sys.version)
Python 3.8.10 | packaged by conda-forge | (default, May 11 2021, 07:01:05)
[GCC 9.3.0]
# conda install scikit-learn numpy scipy -y
>>> import sklearn; print("Scikit-learn", sklearn.__version__)
Scikit-learn 0.24.2
>>> import numpy; print("NumPy", numpy.__version__)
NumPy 1.21.2
>>> import scipy; print("SciPy", scipy.__version__)
SciPy 1.7.1
Hi there! Thanks for opening this issue. Trying to install it from conda-forge, I am getting exactly the same issue. My initial guess is that's because Python 3.8 & 3.9 are not explicitly specified in the setup.py file. I am guessing that you are probably also using one of these two more recent versions of Python.
I will make a new Biopandas release with the updated setup.py and see if that solves the issue.
Alright, the problem should be fixed now. When you run conda install biopandas -c conda-forge
it should install version 0.2.9 now.
@rasbt, wonderful, thank you very much!