BioX-NKU

Pinned Repositories

ASTER
ASTER: accurately estimating the number of cell types in single-cell chromatin accessibility data
Language:Python51
ASTER_reproducibility
The reproducibility of ASTER
Language:Python00
biox-nku.github.io
Homepage of BioX Lab at Nankai University.
Language:CSS00
CASCADE
Accurate Annotation for Differentiating and Imbalanced Cell Types in Single-cell Chromatin Accessibility Data
Language:Python00
EpiCarousel
Memory- and time-efficient identification of metacells for atlas-level single-cell chromatin accessibility data
Language:Python10
RAINBOW
Accurate cell type annotation for single-cell chromatin accessibility data via contrastive learning and reference guidance
Language:Python00
scButterfly
A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders
Language:Python15 1 52
scButterfly_source
Source codes for the reproduction of scButterfly
Language:Jupyter Notebook4 1 00
scCASE
Accurate and interpretable enhancement for single-cell chromatin accessibility sequencing data
Language:Jupyter Notebook2 1 00
SINFONIA
scalable identification of spatially variable genes for deciphering spatial domains
Language:Python8 1 02

BioX-NKU's Repositories

BioX-NKU/scButterfly
A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders
Language:Python15 1 52
BioX-NKU/SINFONIA
scalable identification of spatially variable genes for deciphering spatial domains
Language:Python8 1 02
BioX-NKU/ASTER
ASTER: accurately estimating the number of cell types in single-cell chromatin accessibility data
Language:Python51
BioX-NKU/scButterfly_source
Source codes for the reproduction of scButterfly
Language:Jupyter Notebook4 1 00
BioX-NKU/scCASE
Accurate and interpretable enhancement for single-cell chromatin accessibility sequencing data
Language:Jupyter Notebook2 1 00
BioX-NKU/EpiCarousel
Memory- and time-efficient identification of metacells for atlas-level single-cell chromatin accessibility data
Language:Python10
BioX-NKU/ASTER_reproducibility
The reproducibility of ASTER
Language:Python00
BioX-NKU/biox-nku.github.io
Homepage of BioX Lab at Nankai University.
Language:CSS00
BioX-NKU/CASCADE
Accurate Annotation for Differentiating and Imbalanced Cell Types in Single-cell Chromatin Accessibility Data
Language:Python00
BioX-NKU/RAINBOW
Accurate cell type annotation for single-cell chromatin accessibility data via contrastive learning and reference guidance
Language:Python00
BioX-NKU/scCrab
A reference-guided cancer cell identification method based on Bayesian neural networks
Language:Jupyter Notebook