Use BlueGraph on Connectome Analysis
KeremKurban opened this issue · 0 comments
Hello BlueGraph Team,
I was working on BBP circuits via representing them as graph, analyzing the motifs but couldnt find a way to visualize these dense graphs. Then I came across this platform thanks to Cyrille Favreau. Is there a jira project assigned to this ?
So far i have used networkx and igraph (more scalable as i was told) to analyses. but mostly I store my graph in adjacency matrix format and do operations on scipy.sparse module. I started to use Neo4j but the syntax is a bit annoying. So making a python backend would be very nice and scalable when we integrate it to bluegraph
Here are my projects if i can have a nice UI for the graph:
- Utilize 5th floor screen, open deck to visualize the graph to do lots of cool stuff
- Connect it to python scripts we already have.
- Make novel and visualization-based simulation analyses. See VIZTM-860, and also this cool company's work and demo video https://cambridge-intelligence.com/products/ on static and dynamic analyses of graph data.
Since we have this software and brain is a graph, i say lets use it on it :)
All the best,
Kerem