Pinned Repositories
ConText
SKOSEditor
VAReadmissionMoonstone
Moonstone NLP system applied to VA project to study the analysis of social risk factors applied to hospital readmission
pyConText-carotid-stenosis-detection
The purpose of this tool is to extract mentions of carotid stenosis, categorize the mentions into 3 classes (no stenosis, insignificant stenosis, or significant stenosis) and, then classify the whole document according to the most significant mention level encoded within the document.
resource_ontologies
pyConTextPipeline
Pipeline tool for pyConTextNLP developed for VA/VINCI use that adds a CLI, misspellings finder, database I/O, batching, multiprocessing, several sentence splitters, and eHOST output
ie-viz
The Information Extraction and Visualization Toolkit Centralized Architecture prototype is designed for generating and visualizing clinical notes annotations for VA patient narratives and connecting with the relevant ontologies.
FamilyHistoryFeatureEncoder
Family History Feature Encoder retrieves the best features needed to demonstrate the feasibility of extracting individualized patient cancer risk assessments for breast, ovarian, and colon cancer and leveraging risk factors based on family history information from clinical texts
domainOntology
Blulab-Utah.github.io
Blulab Homepage
Blulab-Utah's Repositories
Blulab-Utah/domainOntology
Blulab-Utah/ie-viz
The Information Extraction and Visualization Toolkit Centralized Architecture prototype is designed for generating and visualizing clinical notes annotations for VA patient narratives and connecting with the relevant ontologies.
Blulab-Utah/Blulab-Utah.github.io
Blulab Homepage
Blulab-Utah/MoonstoneDemo
Demonstration of Moonstone, with Powerpoint tutorial on creating new grammar rules
Blulab-Utah/pyConTextPipeline
Pipeline tool for pyConTextNLP developed for VA/VINCI use that adds a CLI, misspellings finder, database I/O, batching, multiprocessing, several sentence splitters, and eHOST output
Blulab-Utah/KA_API
Blulab-Utah/LexiconMapping
A data extraction component by incorporating an API that could extract family-relationship information related to all the HL7 and SNOMED standard codes across an entire domain.
Blulab-Utah/VAReadmissionMoonstone
Moonstone NLP system applied to VA project to study the analysis of social risk factors applied to hospital readmission
Blulab-Utah/nlptools
This repository consists of Clinical NLP tools collection built at BluLab
Blulab-Utah/NobleMentions
Blulab-Utah/FamilyHistoryFeatureEncoder
Family History Feature Encoder retrieves the best features needed to demonstrate the feasibility of extracting individualized patient cancer risk assessments for breast, ovarian, and colon cancer and leveraging risk factors based on family history information from clinical texts
Blulab-Utah/resource_ontologies
Blulab-Utah/knowledgeAuthor
Blulab-Utah/MoonstoneServlet2
Blulab-Utah/AMI-RO1
AMI R01 HL 130828 Information Extraction from EMRs to Predict Readmission following AMI
Blulab-Utah/GitTest
Blulab-Utah/pyConText-carotid-stenosis-detection
The purpose of this tool is to extract mentions of carotid stenosis, categorize the mentions into 3 classes (no stenosis, insignificant stenosis, or significant stenosis) and, then classify the whole document according to the most significant mention level encoded within the document.
Blulab-Utah/SKOSEditor
Blulab-Utah/ConText
Blulab-Utah/VIP-regex