/app-drop_bad-epo

Primary LanguagePythonMIT LicenseMIT

Drop bad epochs

Brainlife App to reject bad epochs using MNE-Python epoch.drop.

Documentation

Input files are:

  • a MEG file in fif format (mne/epochs).

Input parameters are:

  • drop: str , The comma-separated list of epochs to drop (e.g. "1, 25, 32").

Ouput files are:

  • the updated MEG file in fif format (mne/epochs), where the epochs have been removed.

Authors

Funding Acknowledgement

brainlife.io is publicly funded and for the sustainability of the project it is helpful to Acknowledge the use of the platform. We kindly ask that you acknowledge the funding below in your code and publications. Copy and past the following lines into your repository when using this code.

NSF-BCS-1734853 NSF-BCS-1636893 NSF-ACI-1916518 NSF-IIS-1912270 NIH-NIBIB-R01EB029272

Citations

  1. Avesani, P., McPherson, B., Hayashi, S. et al. The open diffusion data derivatives, brain data upcycling via integrated publishing of derivatives and reproducible open cloud services. Sci Data 6, 69 (2019). https://doi.org/10.1038/s41597-019-0073-y