Expectation-Maximization

Expectation-Maximization (EM) algorithm in Matlab

This code implements the Expectation-Maximization (EM) algorithm and tests it on a simple 2D dataset.

The Expectation–Maximization (EM) algorithm is an iterative method to find maximum likelihood or maximum a posteriori (MAP) estimates of parameters in statistical models, where the model depends on unobserved latent variables. The EM iteration alternates between performing an expectation (E) step, which creates a function for the expectation of the log-likelihood evaluated using the current estimate for the parameters, and a maximization (M) step, which computes parameters maximizing the expected log-likelihood found on the E step. These parameter-estimates are then used to determine the distribution of the latent variables in the next E step.

Example

In this example, we first generate a dataset of points from two Normal distributions and label the dataset. This dataset with correct labels are our true values. Then we reshuffle the labels and run the EM algorithm for the new dataset. The EM algorithm clusters the dataset correctly and also estimates the parameters of two Normal distributions that could be used to draw the points.

Result

The result that I get on my machine is as follows:

iteration: 1, error: 1.7244, mu1: [1.2662 1.7053], mu2: [3.6623 3.0902] 
iteration: 2, error: 2.6173, mu1: [0.3989 2.7791], mu2: [4.3558 2.0659] 
iteration: 3, error: 3.2419, mu1: [0.0288 4.2253], mu2: [5.0751 0.4715] 
iteration: 4, error: 0.6577, mu1: [0.0377 4.5441], mu2: [5.0656 0.1329] 
iteration: 5, error: 0.3204, mu1: [0.1280 4.6579], mu2: [5.0202 -0.0363] 
iteration: 6, error: 0.1810, mu1: [0.1833 4.7249], mu2: [4.9603 -0.1089] 
iteration: 7, error: 0.0000, mu1: [0.1833 4.7249], mu2: [4.9603 -0.1089]

Version

How do I get set up?

MATLAB

The algorithm is coded in MATLAB
No extra Toolbox is required
clone the repository,
In Matlab, set the code folder as the current path and run the test_em.m file.

How do I get set up? The 1D version###

The algorithm is coded in MATLAB
No extra Toolbox is required
clone the repository,
In Matlab, set the code folder as the current path and run the test_em.m file.
Then Run get_cluster_ans giving nessasarry parameters
data_set - the data which you want to find in which cluster
Clustered_Data - Data_f variable created from running test_em.m