Pinned Repositories
cholect45
Laparoscopic video dataset for surgical action triplet recognition
cholect50
A repository for surgical action triplet dataset. Data are videos of laparoscopic cholecystectomy that have been annotated with <instrument, verb, target> labels for every surgical fine-grained activity.
ConvLSTM-Surgical-Tool-Tracker
This repo contains an implementation code for the weakly supervised surgical tool tracker. In this research, the temporal dependency in surgical video data is modeled using a convolutional LSTM which is trained only on image level labels to detect, localize and track surgical instruments.
Endoscapes
Official Repository for the Endoscapes Dataset for Surgical Scene Segmentation, Object Detection, and Critical View of Safety Assessment
MVOR
Multi-View Operating Room (MVOR) dataset consists of synchronized multi-view frames recorded by three RGB-D cameras in a hybrid OR during real clinical interventions. We provide camera calibration parameters, color and depth frames, human bounding boxes, and 2D/3D pose annotations. The MVOR was released in the MICCAI-LABELS 2018 workshop.
ORPose-Depth
Inference demo and evaluation scripts for the MICCAI-2019 paper "Human Pose Estimation on Privacy-Preserving Low-Resolution Depth Images"
rendezvous
A transformer-inspired neural network for surgical action triplet recognition from laparoscopic videos.
SelfSupSurg
Official repository for "Dissecting Self-Supervised Learning Methods for Surgical Computer Vision"
SSG-VQA
SSG-VQA is a Visual Question Answering (VQA) dataset on laparoscopic videos providing diverse, geometrically grounded, unbiased and surgical action-oriented queries generated using scene graphs.
TF-Cholec80
Library packaging the Cholec80 dataset for easy handling with Tensorflow.
Research Group CAMMA's Repositories
CAMMA-public/MVOR
Multi-View Operating Room (MVOR) dataset consists of synchronized multi-view frames recorded by three RGB-D cameras in a hybrid OR during real clinical interventions. We provide camera calibration parameters, color and depth frames, human bounding boxes, and 2D/3D pose annotations. The MVOR was released in the MICCAI-LABELS 2018 workshop.
CAMMA-public/cholect45
Laparoscopic video dataset for surgical action triplet recognition
CAMMA-public/cholect50
A repository for surgical action triplet dataset. Data are videos of laparoscopic cholecystectomy that have been annotated with <instrument, verb, target> labels for every surgical fine-grained activity.
CAMMA-public/SelfSupSurg
Official repository for "Dissecting Self-Supervised Learning Methods for Surgical Computer Vision"
CAMMA-public/Endoscapes
Official Repository for the Endoscapes Dataset for Surgical Scene Segmentation, Object Detection, and Critical View of Safety Assessment
CAMMA-public/SSG-VQA
SSG-VQA is a Visual Question Answering (VQA) dataset on laparoscopic videos providing diverse, geometrically grounded, unbiased and surgical action-oriented queries generated using scene graphs.
CAMMA-public/rendezvous
A transformer-inspired neural network for surgical action triplet recognition from laparoscopic videos.
CAMMA-public/TF-Cholec80
Library packaging the Cholec80 dataset for easy handling with Tensorflow.
CAMMA-public/SurgLatentGraph
This repository contains the code associated with our 2023 TMI paper "Latent Graph Representations for Critical View of Safety Assessment" and our MICCAI 2023 paper "Encoding Surgical Videos as Spatiotemporal Graphs for Object and Anatomy-Driven Reasoning".
CAMMA-public/AI4surgery
Short tutorial supplementing the Neural Networks and Deep Learning chapter from Artificial Intelligence in Surgery: An AI Primer for Surgical Practice designed to offer hands-on experience with artificial neural networks to surgeons with little to no coding experience.
CAMMA-public/tripnet
CAMMA-public/SelfPose3d
Official code for "SelfPose3d: Self-Supervised Multi-Person Multi-View 3d Pose Estimation"
CAMMA-public/ivtmetrics
A Python evaluation metrics package for surgical action triplet recognition
CAMMA-public/Surgical-Phase-Recognition
Demo for surgical phase recognition on videos of laparoscopic cholecystectomy using a CNN-biLSTM-CRF model presented in "Learning from a tiny dataset of manual annotations: a teacher/student approach for surgical phase recognition" (IPCAI 2019)
CAMMA-public/ORPose-Color
Inference demo for the MICCAI-2020 paper "Self-supervision on Unlabelled OR Data for Multi-person 2D/3D Human Pose Estimation"
CAMMA-public/cholectriplet2022
CholecTriplet 2022 challenge on surgical action triplet detection
CAMMA-public/attention-tripnet
CAMMA-public/indexity
Indexity is a web-based tool designed for medical video annotation in surgical data science projects.
CAMMA-public/cholectrack20
CAMMA-public/rendezvous-in-time
rendezvous-in-time
CAMMA-public/SurgVLP
Learning multi-modal representations by watching hundreds of surgical video lectures
CAMMA-public/out-of-body-detector
Application for classifying out-of-body images in endoscopic videos
CAMMA-public/cholectriplet2021
CAMMA-public/MultiBypass140
CAMMA-public/HPE-AdaptOR
Code for Unsupervised domain adaptation for clinician pose estimation and instance segmentation in the OR
CAMMA-public/cvs_annotator
Application for reviewing and annotating frames with critical view of safety (CVS) criteria and other relevant information
CAMMA-public/med-moco
Overcoming Dimensional Collapse in Self-supervised Contrastive Learning for Medical Image Segmentation
CAMMA-public/mcit-ig
CAMMA-public/.github
CAMMA-public/surgical-imagen