/gemm

GeMM - Genome explicit Metacommunity Model

Primary LanguageJuliaMIT LicenseMIT

GeMM

DOI

This is the Genome-explicit Metacommunity Model, an individual-based model for eco-evolutionary experiments. Created by the University of Würzburg Ecosystem Modeling Group and first published in:

Leidinger, L., Vedder, D., & Cabral, J. S. (2021). Temporal environmental variation may impose differential selection on both genomic and ecological traits. Oikos, 130(7), 1100-1115. https://doi.org/10.1111/oik.08172

For the documentation, see:

  • USAGE.md how to set up and run simulations with GeMM.

  • LICENSE.md text of the open-source software license.

  • PUBLICATIONS.md list of publications based on GeMM.

  • docs/ODD.md "Overview, Design concepts, and Details" document describing the biological side of the model.

  • docs/ARCHITECTURE.md high-level overview of the model source code.

  • docs/index.hmtl autogenerated documentation of all functions in the main Julia model (not viewable on GitHub).

  • docs/HACKING.md instructions for development work on the model, tailored to the Zosterops study.

The current active development branch is Zosterops.

© 2017-2022 Ludwig Leidinger, Daniel Vedder, Robin Rölz.
Licensed under the terms of the MIT license.