Tools for working with fasta files.
The fastatools package was developed by the United States Food and Drug Administration, Center for Food Safety and Applied Nutrition.
- Free software
- Documentation: https://fastatools.readthedocs.io
- Source Code: https://github.com/CFSAN-Biostatistics/fastatools
- PyPI Distribution: https://pypi.python.org/pypi/fastatools
- Print the lengths of sequences.
- Determine if two fasta files are equivalent.
- Fix inconsistent line lengths and inconsistent lowercase.
- Generate a reverse complement of a fasta file.
- Extract a slice from a fasta file delimited by primers.
- Extract a range of positions from a fasta file.
To cite fastatools, please reference the fastatools GitHub repository:
https://github.com/CFSAN-Biostatistics/fastatools
See the LICENSE file included in the fastatools distribution.