/predictKAMreduction

Public repository for "Predicting Knee Adduction Moment Response to Gait Retraining with Minimal Clinical Data" in PLOS Comp Bio (2022)

Primary LanguageMATLAB

Predicting Knee Adduction Moment Response to Gait Retraining with Minimal Clinical Data

Link to paper

Citation:

Rokhmanova N, Kuchenbecker KJ, Shull PB, Ferber R, Halilaj E (2022) Predicting knee adduction moment response to gait retraining with minimal clinical data. PLoS Comput Biol 18(5): e1009500. https://doi.org/10.1371/journal.pcbi.1009500

About:

Although foot progression angle gait retraining is overall beneficial as a conservative intervention for knee osteoarthritis, knee adduction moment (KAM) reductions are not consistent across patients. Moreover, customized gait interventions are time-consuming and require instrumentation not commonly available in the clinic. We present a model that uses minimal clinical data to predict the extent of first peak KAM reduction after toe-in gait retraining. Given the lack of large public datasets that contain different gaits for the same patient, we present a method to generate toe-in gait data synthetically, and share the resultant trained model.

Description of Data and Methods

Getting started:

Data are freely available for download at: https://simtk.org/projects/predict-kam
With the exception of a functional data analysis (FDA) component for smoothing toe-in patterns (Python), all data and code runs in MATLAB. For running FDA, refer to scikit-FDA documentation for installation: https://fda.readthedocs.io/en/latest/

Scripts for processing each institution's data are contained in the folders by their name.
The trained predictive model and learned toe-in patterns to generate synthetic toe-in gait are shared in the Models folder.