Pinned Repositories
alfie
A neural network for alignment-free, kingdom-level classification of eDNA
coil
An R package for pre-processing and error evaluation of COI-5P barcode data
debar
A sequence-by-sequence denoiser for COI DNA barcode and metabarcode data
email-report
A modular template for scraping data from the web to send yourself scheduled email reports
golang-practice
Small go coding problems I do to stay in practice
kaggle-code
A repository for some of the code I used in kaggle data science & machine learning tasks.
py-morse-code
A morse code class for translation between morse and alphanumeric encodings, which supports text and audio message representation
RedfishAmpliconPipe
A snakemake pipeline for processing of redfish amplicon data
SalmonEuAdmix
A machine learning-based library for estimating European admixture proportions in Atlantic salmon
CNuge's Repositories
CNuge/CtCI-6th-Edition-Python
Cracking the Coding Interview 6th Ed. Python Solutions
CNuge/chromosome-plot
example code for visualizing genome wide data using ggplot
CNuge/miscellaneous_scripts
Various python programs I use for the manipulation of SNP genotype datasets and other bioinformatics tasks. This repository features miscellaneous scripts to help work efficiently in common bioinformatics tasks I encounter. Use at own risk
CNuge/aas
Code to accompany Advanced Analytics with Spark from O'Reilly Media
CNuge/aboutRMarkdown
A short tutorial to learn about R Markdown
CNuge/BigQuery_Helper
Helper class to simplify common read-only BigQuery tasks.
CNuge/BRRR
Rap adlibs in R.
CNuge/hmm_docs
CNuge/limix-tutorials
Limix tutorials and demos
CNuge/mvqtlcim
CIM QTL mapping via multivariate statistical method in an outbred full-sib family
CNuge/pandas-datareader
CNuge/phase-imputation
This program leverages zero recombination clusters and their relative positions on a linkage group to impute phases for missing data with high fidelity.
CNuge/SendCode
Send code and text to macOS and Linux Terminals, iTerm, ConEmu, Cmder, Tmux, TerminalView; R (RStudio), Julia, IPython.
CNuge/split-apply-options