CPRyan
Assoc. Research Scientist at the Columbia Aging Center studying the role of lifestyle and the environment in biological aging. DNA methylation, statistics, R.
Columbia UniversityNew York, New York
Pinned Repositories
CALERIE_Genomic_Data_Resource
This repository will provide home for code related to CALERIE genomic data resource.
Catchup_Growth
Repository for catchup growth/epigenetic age project with Milan.
Cebu_reproductive_histories
cellclockr
Streamline the analysis of associations between epigenetic clocks and immune cell composition across various exposures and contexts
Cells-and-Clocks-Analysis
Repo for Columbia Aging Center GeroScience Core and UBC Kobor lab collaboration looking at cell-clock associations across exposures and contexts.
CPRyan.github.io
Professional Website for Calen Patrick Ryan, PhD
DunedinPACE
Code to implement the DunedinPACE scoring algorithm in Illumina 450k or EPIC array data
DunedinPoAm38
R package to implement DunedinPoAm38 in Illumina EPIC and 450k array data
Fetal_Outcomes
Maternal epigenetic age/Fetal outcomes project with Raviraj Rege
NHANES_CoR
Project with Talia Shirazi and Waylon Hastings on CoR using biological measures in the NHANES dataset
CPRyan's Repositories
CPRyan/Catchup_Growth
Repository for catchup growth/epigenetic age project with Milan.
CPRyan/cellclockr
Streamline the analysis of associations between epigenetic clocks and immune cell composition across various exposures and contexts
CPRyan/DunedinPACE
Code to implement the DunedinPACE scoring algorithm in Illumina 450k or EPIC array data
CPRyan/Fetal_Outcomes
Maternal epigenetic age/Fetal outcomes project with Raviraj Rege
CPRyan/NHANES_CoR
Project with Talia Shirazi and Waylon Hastings on CoR using biological measures in the NHANES dataset
CPRyan/CALERIE_Genomic_Data_Resource
This repository will provide home for code related to CALERIE genomic data resource.
CPRyan/Cebu_reproductive_histories
CPRyan/Cells-and-Clocks-Analysis
Repo for Columbia Aging Center GeroScience Core and UBC Kobor lab collaboration looking at cell-clock associations across exposures and contexts.
CPRyan/CPRyan.github.io
Professional Website for Calen Patrick Ryan, PhD
CPRyan/DunedinPoAm38
R package to implement DunedinPoAm38 in Illumina EPIC and 450k array data
CPRyan/Example_DNAm_Betas
Subset of data from Lehne et al. 2015
CPRyan/General_Analysis
Catch all repository for side analyses and nonsense
CPRyan/male_reproductive_epigenetics
CPRyan/methylation-lab
Example workflow for analyzing epigenome-wide DNA methylation data
CPRyan/Nicole_Gladish
Analysis Code for Published Manuscripts
CPRyan/PC_EWAS
Project exploring utility of regionally based dimension reduction for increasing reliability and power in epigenome-wide association studies.
CPRyan/planets
Toy Repo for refresher course on Github
CPRyan/Resub
CoR Paper: March7
CPRyan/ROC
Overview of pROC R Package
CPRyan/RSoundCloud
Soundcloud API wrapper functions in R - SoundCloud and R = Hopefully cool if I can get access!
CPRyan/STAT540-UBC.github.io
Public repository of STAT540@University of British Columbia. Statistical Methods for High Dimensional Biology
CPRyan/team_Methylhomies