Cámara Lab
The Cámara lab focuses on the development and application of innovative computational approaches to the study of cellular heterogeneity and its role in disease.
University of Pennsylvania, Philadelphia, PA
Pinned Repositories
AdjacencyScore
R package assessing co-localization of features in a graph
CAJAL
A Python package using Gromov-Wasserstein distance to compare cell shapes
ConDecon
R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA-seq data.
EPN_Classifier
EPNClassifier assigns ependymal tumors profiled by bulk transcriptomics (RNA-seq or microarrays) into molecular subgroups.
ImmunoPheno
RayleighSelection
An R package for feature selection in topological spaces.
scTDA
An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data
STvEA
Spatially-resolved Transcriptomics via Epitope Anchoring
TARGet
Topological inference of horizontal evolution from multiple sequence alignments
TDA-TCGA
R package for the identification of cancer-associated mutated genes using gene expression and mutation data.
Cámara Lab's Repositories
CamaraLab/scTDA
An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data
CamaraLab/STvEA
Spatially-resolved Transcriptomics via Epitope Anchoring
CamaraLab/CAJAL
A Python package using Gromov-Wasserstein distance to compare cell shapes
CamaraLab/RayleighSelection
An R package for feature selection in topological spaces.
CamaraLab/TDA-TCGA
R package for the identification of cancer-associated mutated genes using gene expression and mutation data.
CamaraLab/ConDecon
R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA-seq data.
CamaraLab/AdjacencyScore
R package assessing co-localization of features in a graph
CamaraLab/EPN_Classifier
EPNClassifier assigns ependymal tumors profiled by bulk transcriptomics (RNA-seq or microarrays) into molecular subgroups.
CamaraLab/ImmunoPheno
CamaraLab/moduli
CamaraLab/TARGet
Topological inference of horizontal evolution from multiple sequence alignments