Pinned Repositories
Agora
Algorithm For Gene Order Reconstruction in Ancestors
AleRax
Gene tree - species tree reconciliation from gene tree distributions
bioawk
BWK awk modified for biological data
BioScripts
cactus
Official home of genome aligner based upon notion of Cactus graphs
Chromosome_evolution_Lepidoptera_MS
Scripts associated with 'Chromosome Evolution in Lepidoptera' manuscript
genomics_tools
Python scripts to manipulate genomic data
Machine-Learning-Course-2days
Proj_Fagales
The pipelines used in project "Karyotype evolution of Fagales order"
protocols-for-karst-adaptation-of-Platycarya
Caoyu819-protocols-for-karst-adaptation-of-Platycarya
Caoyu819's Repositories
Caoyu819/Proj_Fagales
The pipelines used in project "Karyotype evolution of Fagales order"
Caoyu819/genomics_tools
Python scripts to manipulate genomic data
Caoyu819/AleRax
Gene tree - species tree reconciliation from gene tree distributions
Caoyu819/Chromosome_evolution_Lepidoptera_MS
Scripts associated with 'Chromosome Evolution in Lepidoptera' manuscript
Caoyu819/protocols-for-karst-adaptation-of-Platycarya
Caoyu819-protocols-for-karst-adaptation-of-Platycarya
Caoyu819/SummerSchool_2023
polyploidy_RNA-seq_analysis
Caoyu819/smudgeplot
Inference of ploidy and heterozygosity structure using whole genome sequencing data
Caoyu819/pseudopipe
pipeline for pseudogene prediction and analysis
Caoyu819/RACCROCHE
Ancestral genomes reconstruction by co-occurance matrix
Caoyu819/Agora
Algorithm For Gene Order Reconstruction in Ancestors
Caoyu819/cactus
Official home of genome aligner based upon notion of Cactus graphs
Caoyu819/syntenet
An R package to infer and analyze synteny networks from protein sequences
Caoyu819/Machine-Learning-Course-2days
Caoyu819/wgdi
WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes
Caoyu819/bioawk
BWK awk modified for biological data
Caoyu819/BioScripts