CarragherLab
Edinburgh Drug Discovery group, Cancer Research UK Edinburgh Centre
University of Edinburgh, UK.
Pinned Repositories
2018-08_transfer_ML_between_cell_lines
CellProfiler
An open-source application for biological image analysis
cpchecker
Check for failed cellprofiler jobs on eddie3
cptools2
Running cellprofiler on eddie3 / SGE clusters
ImageXpressR
R package for extracting metadata from ImageXpress file paths
install_cellprofiler
Documentation and scripts to install CellProfiler on eddie3
meld
Collect distributed cellprofiler results into sqlite databases.
parserix
parse metadata from ImageXpress paths
phenonaut
A tool for exploration of multiomic phenotypic space
sc_morph_tracking
The script for article "Single-cell morphological tracking of cell states to identify small-molecule modulators of liver differentiation".
CarragherLab's Repositories
CarragherLab/phenonaut
A tool for exploration of multiomic phenotypic space
CarragherLab/cptools2
Running cellprofiler on eddie3 / SGE clusters
CarragherLab/2018-08_transfer_ML_between_cell_lines
CarragherLab/CellProfiler
An open-source application for biological image analysis
CarragherLab/cpchecker
Check for failed cellprofiler jobs on eddie3
CarragherLab/ImageXpressR
R package for extracting metadata from ImageXpress file paths
CarragherLab/install_cellprofiler
Documentation and scripts to install CellProfiler on eddie3
CarragherLab/meld
Collect distributed cellprofiler results into sqlite databases.
CarragherLab/parserix
parse metadata from ImageXpress paths
CarragherLab/sc_morph_tracking
The script for article "Single-cell morphological tracking of cell states to identify small-molecule modulators of liver differentiation".
CarragherLab/scissorhands
Generate eddie3 submission scripts in python