Cecilia-Sensalari

Pinned Repositories

• ksrates

  ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.

  Language:Python169

• ENA-metadata-templates

  TSV and XLSX templates for submitting ENA objects (study, experiment, sample and run) using the ENA-upload-tool

  Language:Python00

• ksrates

  ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.

  Language:Python00

• wgd

  Python package and CLI for whole-genome duplication related analyses

  Language:Python00

• wgd

  Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche-psb/wgd.

  Language:Python8541

• ena-upload-cli

  ENA upload tool - script your Open Data upload to the European Nucleotide Archive

  Language:Python2816

• tidytacos

  Functions to manipulate and visualize microbial community data

  Language:R91

• ENA-metadata-templates

  TSV and XLSX templates for submitting ENA objects (study, experiment, sample and run) using the ENA-upload-tool

  Language:Python54

• OrthoMCLight

  OrthoMCLight is an edited version of OrthoMCL v1.4 that requires less memory and has a faster runtime. It is a genome-scale algorithm for grouping orthologous protein sequences.

  Language:Perl00

Cecilia-Sensalari's Repositories