CeresBarros
Ecological modeller and researcher interested in ecosystem stability and resilience to global change
@PredictiveEcology
Pinned Repositories
actions
collection of GitHub Actions workflows
ade4
Analysis of Ecological Data : Exploratory and Euclidean Methods in Environmental Sciences
Biomass_borealDataPrep
Module to parameterize the Landis Biomass Succession Model in R, for the Canadian Boreal forest
Biomass_core
A port of Landis II Biomass Succession Model in R
Biomass_fuels
SpaDES version of the LANDIS-II Dynamic Biomass Fuels Extension
LandR-Manual
Manual of the LandR ecosystem of SpaDES modules
LandRBiomass_publication
Complete LandR Biomass workflow used in Barros et al. 2023 (doi: 10.1111/2041-210X.14034)
reproducible-workflows-example
Example of a simple reproducible workflow based in R and RStudio projects
SpaDES4Dummies
A SpaDES crash-course with two tutorials
Biomass_core
Core vegetation dynamics module for LandR. based on LANDIS-II Biomass Succession Extension v3.2.1
CeresBarros's Repositories
CeresBarros/reproducible-workflows-example
Example of a simple reproducible workflow based in R and RStudio projects
CeresBarros/SpaDES4Dummies
A SpaDES crash-course with two tutorials
CeresBarros/Biomass_borealDataPrep
Module to parameterize the Landis Biomass Succession Model in R, for the Canadian Boreal forest
CeresBarros/Biomass_core
A port of Landis II Biomass Succession Model in R
CeresBarros/Biomass_fuels
SpaDES version of the LANDIS-II Dynamic Biomass Fuels Extension
CeresBarros/LandRBiomass_publication
Complete LandR Biomass workflow used in Barros et al. 2023 (doi: 10.1111/2041-210X.14034)
CeresBarros/Biomass_regeneration
Post-disturbance biomass regeneration module for LandR
CeresBarros/Biomass_regenerationPM
Post-disturbance biomass regeneration module for LandR. Serotiny and resprouting mechanisms follow LANDIS-II Biomass Succession extension, v3.2.1, and partial mortality (with total cohort removal) follows LANDIS-II Dynamic Fire System v3.0
CeresBarros/Biomass_speciesData
CeresBarros/Biomass_speciesParameters
CeresBarros/Biomass_validationKNN
Validation module for LandR Biomass predictions of forest succession
CeresBarros/biomod2
BIOMOD is a computer platform for ensemble forecasting of species distributions, enabling the treatment of a range of methodological uncertainties in models and the examination of species-environment relationships.
CeresBarros/climr
An R package for downscaling monthly climate data for North America
CeresBarros/FavierFireSpread
A fire spread LandR Biomass module based on the fire percolation model by Favier (2004)
CeresBarros/FFEC-website
Future Forest Ecosystems Centre website
CeresBarros/fireSense_dataPrepFit
CeresBarros/fireSense_IgnitionFit
Repository of fireSense_IgnitionFit, a SpaDES module
CeresBarros/fireSense_SpreadFit
Repository of fireSense_SpreadFit, a SpaDES module
CeresBarros/LandR
Landscape Ecosystem Modelling in R
CeresBarros/ms_downscaling_metawebs
Spatially explicit predictions of food web structure from regional level data
CeresBarros/PredictiveEcology.org
A blog about prediction in ecology: the science, the complexity and the computation
CeresBarros/PSPclean
basic treatment and standardization of PSP data
CeresBarros/RDN-website
CeresBarros/reproducible
A set of tools for R that enhance reproducibility beyond package management
CeresBarros/reproducible-workflowsWS
A website hosting materials used for reproducible workflow workshops in R
CeresBarros/SpaDES.core
Core functionality for Spatial Discrete Event Simulation (SpaDES)
CeresBarros/SpaDES.experiment
Simulation experiments within the SpaDES ecosystem.
CeresBarros/SpaDES.project
Project Templates Using 'SpaDES'
CeresBarros/ToolsCB
Miscellaneous R functions
CeresBarros/TrophicNetRobWF
Contains the workflow code used in Box 3 of Dansereau et al. in prep