/PaperScripts

Scripts for our papers. Readers can check, replicate or make use of the scripts in their future studies.

Primary LanguageMATLAB

PaperScripts

Scripts for our papers. Readers can check, replicate or make use of the scripts in their future studies.

Chen_2017_HBM:

Chen, X., Lu, B., Yan, C.G. (2018). Reproducibility of R-fMRI metrics on the impact of different strategies for multiple comparison correction and sample sizes. Hum Brain Mapp, 39(1), 300-318, doi:10.1002/hbm.23843.

Chen_2020_NeuroImage:

Chen, X., Chen, N.X., Shen, Y.Q., Li, H.X., Li, L., Lu, B., Zhu, Z.C., Fan, Z., Yan, C.G. (2020). The subsystem mechanism of default mode network underlying rumination: A reproducible neuroimaging study. Neuroimage, 221, 117185, doi:10.1016/j.neuroimage.2020.117185.

Chen_2021_NeuroImage:

Chen, X., Yan, C.-G. (2021). Hypostability in the default mode network and hyperstability in the frontoparietal control network of dynamic functional architecture during rumination. Neuroimage, 241, 118427, doi:10.1016/j.neuroimage.2021.118427.

Li_2019_NeuroImage:

Li, L., Lu, B., Yan, C.G. (2020). Stability of dynamic functional architecture differs between brain networks and states. Neuroimage, 216, 116230, doi:10.1016/j.neuroimage.2019.116230.

Li_2021_HBM

Li, L., Su, Y.A., Wu, Y.K., Castellanos, F.X., Li, K., Li, J.T., Si, T.M., Yan, C.G. (2021). Eight-week antidepressant treatment reduces functional connectivity in first-episode drug-na•ve patients with major depressive disorder. Hum Brain Mapp, 42(8), 2593-2605, doi:10.1002/hbm.25391.

LiHX_2021_BehaviorResearchMethods

Li, H.X., Lu, B., Chen, X., Li, X.Y., Castellanos, F.X., Yan, C.G. (2021). Exploring self-generated thoughts in a resting state with natural language processing. Behav Res Methods, doi:10.3758/s13428-021-01710-6.

Shen_2020_JPRP:

Shen, Y.-Q., Zhou, H.-X., Chen, X., Castellanos, F.X., Yan, C.-G. (2020). Meditation effect in changing functional integrations across large-scale brain networks: Preliminary evidence from a meta-analysis of seed-based functional connectivity. Journal of Pacific Rim Psychology, 14, e10, doi:10.1017/prp.2020.1.

Yan_2019_PNAS:

Yan, C.G., Chen, X., Li, L., Castellanos, F.X., Bai, T.J., Bo, Q.J., Cao, J., Chen, G.M., Chen, N.X., Chen, W., Cheng, C., Cheng, Y.Q., Cui, X.L., Duan, J., Fang, Y.R., Gong, Q.Y., Guo, W.B., Hou, Z.H., Hu, L., Kuang, L., Li, F., Li, K.M., Li, T., Liu, Y.S., Liu, Z.N., Long, Y.C., Luo, Q.H., Meng, H.Q., Peng, D.H., Qiu, H.T., Qiu, J., Shen, Y.D., Shi, Y.S., Wang, C.Y., Wang, F., Wang, K., Wang, L., Wang, X., Wang, Y., Wu, X.P., Wu, X.R., Xie, C.M., Xie, G.R., Xie, H.Y., Xie, P., Xu, X.F., Yang, H., Yang, J., Yao, J.S., Yao, S.Q., Yin, Y.Y., Yuan, Y.G., Zhang, A.X., Zhang, H., Zhang, K.R., Zhang, L., Zhang, Z.J., Zhou, R.B., Zhou, Y.T., Zhu, J.J., Zou, C.J., Si, T.M., Zuo, X.N., Zhao, J.P., Zang, Y.F. (2019). Reduced default mode network functional connectivity in patients with recurrent major depressive disorder. Proc Natl Acad Sci U S A, 116(18), 9078-9083, doi:10.1073/pnas.1900390116.

WangYW_2023_NeuroImage:

Wang, Y.W., Chen, X., Yan, C.G. (2023). Comprehensive evaluation of harmonization on functional brain imaging for multisite data-fusion. Neuroimage, 120089, doi:10.1016/j.neuroimage.2023.120089.