PhyloBERT

Installation

Set up virtual environment.

conda create -n phylobert python=3.9
conda activate phylobert

Then install pytorch for your specific CUDA version. For example, if you have CUDA 11.3 then

python -m pip install torch torchvision torchaudio --extra-index-url https://download.pytorch.org/whl/cu113

At the end, install other dependencies.

python -m pip install -r requirements.txt

(WIP)