/uniprotviewer

Program for inspecting uniprot data base of proteins with a field and a string for searching.

Primary LanguagePython

########### uniprotviewer ################

Program for inspecting uniprot data base of proteins for specific searching filters and extracting aminoacid sequences in FASTA format and taxon list for specific proteins.

v0.1 uniprotviewer:

  • backbone for searching inside file

V0.2:

  • Not modlular, added comands:

  • COUNT

  • COUNTALL

  • COUNT COUNTALL

  • SHOWALL

  • added feature: .and. between queries for multiple value to match search in database

V0.3

  • modular,added comands:
  • TAXON
  • BDINSERT db="databasepath"

Comands to do: FASTA