The Clavel lab
This is the official GitHub account for the research group of Prof. Thomas Clavel.
Germany
Pinned Repositories
genome-assembly
A Snakemake workflow assembling bacterial genomes according to the standard operating procedure in the Clavel Lab
github-repo-stats
Statistics aggregation for Github repositories for NFDI4Microbiota KPI
maldipickr
Dereplicate And Cherry-pick Mass Spectrometry Spectra
maldipickrGUI
Workflow template to dereplicate and cherry-pick mass spectrometry spectraAn interactive interface to run reproducible workflow to dereplicate and cherry-pick mass spectrometry spectra with the 'maldipickr' package.
miBC
The Mouse Intestinal Bacterial Collection
MiMiC
Minimal Microbial Consortia creation tools
Protologger
Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights
SCD
Anaerobic Single Cell Dispensing (SCD) for anaerobic cultivation of bacteria from complex samples
workshop-biometadata-01
The Clavel lab's Repositories
ClavelLab/MiMiC
Minimal Microbial Consortia creation tools
ClavelLab/maldipickr
Dereplicate And Cherry-pick Mass Spectrometry Spectra
ClavelLab/genome-assembly
A Snakemake workflow assembling bacterial genomes according to the standard operating procedure in the Clavel Lab
ClavelLab/maldipickrGUI
Workflow template to dereplicate and cherry-pick mass spectrometry spectraAn interactive interface to run reproducible workflow to dereplicate and cherry-pick mass spectrometry spectra with the 'maldipickr' package.
ClavelLab/miBC
The Mouse Intestinal Bacterial Collection
ClavelLab/github-repo-stats
Statistics aggregation for Github repositories for NFDI4Microbiota KPI
ClavelLab/Protologger
Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights
ClavelLab/SCD
Anaerobic Single Cell Dispensing (SCD) for anaerobic cultivation of bacteria from complex samples
ClavelLab/workshop-biometadata-01