/CNV-Clinical-Preprocessing

Subset of scripts created during the CSHL URP 2018. Developing method to extract predictive biomarkers from PDAC patient derived organoids. Using COREs from CNV and WES data from pancreatic tumor organoids to predict chemotherapeutic drug response. This repository investigates copy number preprocessing tools and also preprocesses genomic features for ML analysis.

Primary LanguageJupyter Notebook

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