Cole-Monnahan-NOAA

Quantitative ecologist at NOAA's AFSC

Seattle, WA

Pinned Repositories

admb
AD Model Builder
Language:C++01
adnuts
An R package for NUTS sampling using ADMB
Language:R23 3 1914
bootstrap_retro
Using bootstrapping to inform interpretation of retrospective bias statistics
Language:R00
dsem
Dynamic structural equation models
Language:R00
FishStatsUtils
Shared resources for spatio-temporal models
Language:R00
gengamma_indices
Generalized gamma indices in stock assessments: beyond the lognormal
Language:R00
mixed_resids
Residual analysis for spatial models
Language:HTML2 4 02
PIT_comp_resids
Exploring PIT residuals for compositional data in stock assessments
Language:R02
shinystan
shinystan R package and ShinyStan GUI
Language:R0 1 00
stpollock
A spatio-temporal CPUE analysis combining bottom and acoustic trawl survey data for pollock
Language:R10

Cole-Monnahan-NOAA's Repositories

Cole-Monnahan-NOAA/adnuts
An R package for NUTS sampling using ADMB
Language:R23 3 1914
Cole-Monnahan-NOAA/mixed_resids
Residual analysis for spatial models
Language:HTML2 4 02
Cole-Monnahan-NOAA/stpollock
A spatio-temporal CPUE analysis combining bottom and acoustic trawl survey data for pollock
Language:R10
Cole-Monnahan-NOAA/admb
AD Model Builder
Language:C++01
Cole-Monnahan-NOAA/bootstrap_retro
Using bootstrapping to inform interpretation of retrospective bias statistics
Language:R00
Cole-Monnahan-NOAA/dsem
Dynamic structural equation models
Language:R00
Cole-Monnahan-NOAA/FishStatsUtils
Shared resources for spatio-temporal models
Language:R00
Cole-Monnahan-NOAA/gengamma_indices
Generalized gamma indices in stock assessments: beyond the lognormal
Language:R00
Cole-Monnahan-NOAA/PIT_comp_resids
Exploring PIT residuals for compositional data in stock assessments
Language:R02
Cole-Monnahan-NOAA/shinystan
shinystan R package and ShinyStan GUI
Language:R0 1 00
Cole-Monnahan-NOAA/sparse_nuts
Sparse metrics for no-U-turn sampling in TMB models
Language:C++
Cole-Monnahan-NOAA/stock-synthesis
The source code for stock synthesis
Language:C++
Cole-Monnahan-NOAA/TMB_v_Julia
Compare Julia and TMB for mixed effects models
Language:Julia
Cole-Monnahan-NOAA/tmb_workshop
Univ Concepción (Chile), 15-19 Jan 2018. Fitting hierarchical models in TMB. Instructor: Cole Monnahan
Language:R
Cole-Monnahan-NOAA/VAST
Spatio-temporal analysis of univariate or multivariate data, e.g., standardizing data for multiple species or stages
Language:C++
Cole-Monnahan-NOAA/wham
State-space, age-structured fish stock assessment model

Cole-Monnahan-NOAA

Pinned Repositories

admb

adnuts

bootstrap_retro

dsem

FishStatsUtils

gengamma_indices

mixed_resids

PIT_comp_resids

shinystan

stpollock

Cole-Monnahan-NOAA's Repositories

Cole-Monnahan-NOAA/adnuts

Cole-Monnahan-NOAA/mixed_resids

Cole-Monnahan-NOAA/stpollock

Cole-Monnahan-NOAA/admb

Cole-Monnahan-NOAA/bootstrap_retro

Cole-Monnahan-NOAA/dsem

Cole-Monnahan-NOAA/FishStatsUtils

Cole-Monnahan-NOAA/gengamma_indices

Cole-Monnahan-NOAA/PIT_comp_resids

Cole-Monnahan-NOAA/shinystan

Cole-Monnahan-NOAA/sparse_nuts

Cole-Monnahan-NOAA/stock-synthesis

Cole-Monnahan-NOAA/TMB_v_Julia

Cole-Monnahan-NOAA/tmb_workshop

Cole-Monnahan-NOAA/VAST

Cole-Monnahan-NOAA/wham