Connorr0

Pinned Repositories

mofapy2
Multi-omics factor analysis v2
Language:Python34 3 1428
datasharing
The Leek group guide to data sharing
00
Finkbeiner-et-al.-2021-Cell-REP
Single cell ATACseq of fetal human retina and stem cell-derived retinal organoids shows changing chromatin landscapes during cell fate acquisition.
Language:HTML00
m6A-calling
ML methods for m6A-calling
Language:Jupyter Notebook00
MLcoursework
Projects from Machine Learning coursework
Language:Jupyter Notebook00
monocle3
Language:R00
Single-cellATAC-seq_2020
Holds code for single cell ATAC seq 2020
00
Stone_lab
Stone Lab files only available by request
00
muon
muon is a multimodal omics Python framework
Language:Python208 14 10730
atac_metacell_utilities
Snakemake pipeline for scATAC metacell utilities such as primed and lineage specific scores, chromVAR, in-silico ChIP
Language:Python4 1 100

Connorr0's Repositories

Connorr0/datasharing
The Leek group guide to data sharing
00
Connorr0/Finkbeiner-et-al.-2021-Cell-REP
Single cell ATACseq of fetal human retina and stem cell-derived retinal organoids shows changing chromatin landscapes during cell fate acquisition.
Language:HTML00
Connorr0/m6A-calling
ML methods for m6A-calling
Language:Jupyter Notebook00
Connorr0/MLcoursework
Projects from Machine Learning coursework
Language:Jupyter Notebook00
Connorr0/monocle3
Language:R00
Connorr0/Single-cellATAC-seq_2020
Holds code for single cell ATAC seq 2020
00
Connorr0/Stone_lab
Stone Lab files only available by request
00