Pinned Repositories
apple
Code pertinent to processing untargeted metabolomics data and integrating with SNP array data to see significant associations and visualize results.
apple_phytochemicals
This repository host the document to explore apple phytochemicals detected by untargeted metabolomics
carotenoid-analysis
Tools to aid in carotenoid analysis
metabolomics-tools
A compilation of code helpful in filtering, assessing data quality, and conducting first pass metabolomics analysis.
MS2extract
R package to create in-house MS/MS compound libraries
PhenolicsDB
PhenolicsDB: phenolics MS/MS (LC-ESI-QTOF) database repository
tomato-liver-omics
Untargeted metabolomics code for analysis from Dzakovich et al. of livers of mice fed control, red, or tangerine tomato containing diets.
tomato-pig-microbiome
Whole genome sequencing analysis of gut microbiome of pigs consuming control or tomato containing diets.
Tomato_Steroidal_Alkaloids
TomatoSoy-Obesity-Metabolomics
CooperstoneLab's Repositories
CooperstoneLab/MS2extract
R package to create in-house MS/MS compound libraries
CooperstoneLab/metabolomics-tools
A compilation of code helpful in filtering, assessing data quality, and conducting first pass metabolomics analysis.
CooperstoneLab/PhenolicsDB
PhenolicsDB: phenolics MS/MS (LC-ESI-QTOF) database repository
CooperstoneLab/apple
Code pertinent to processing untargeted metabolomics data and integrating with SNP array data to see significant associations and visualize results.
CooperstoneLab/apple_phytochemicals
This repository host the document to explore apple phytochemicals detected by untargeted metabolomics
CooperstoneLab/carotenoid-analysis
Tools to aid in carotenoid analysis
CooperstoneLab/tomato-liver-omics
Untargeted metabolomics code for analysis from Dzakovich et al. of livers of mice fed control, red, or tangerine tomato containing diets.
CooperstoneLab/tomato-pig-microbiome
Whole genome sequencing analysis of gut microbiome of pigs consuming control or tomato containing diets.
CooperstoneLab/Tomato_Steroidal_Alkaloids
CooperstoneLab/TomatoSoy-Obesity-Metabolomics