LBNL-CRD-Crivelli
Repository for projects conducted by interns at Lawrence Berkeley National Lab under the mentoring of Dr. Silvia Crivelli
Berkeley, CA
Pinned Repositories
InteractivePoster
Package with template interactive poster in Dash
MVP-NEWT
A simple medical Notes application built using NEWT which we can access data through Cori.
OpeNNdd
Open neural network for drug discovery.
OSA_Phenotyping_LLMs
Developing analytic tools for phenotyping Obstructive Sleep Apnea along clinical text.
Protein-Structure-DL
Classification and regression exploration using protein structures
spatial-prediction
Suicide-Prediction
Uses NLP to predict suicide risk among hospital patients
Template-Repo
A template repo for organizing research projects, and guidelines for archiving and documenting.
Tools-for-Multiscale-Method
Computational Tools for Multiscale Molecular Dynamics Simulation
VA_facilities_analysis
This repository contains info for distance/driving hours of county-level centroid points to nearby facilities and VA facilities waiting time
LBNL-CRD-Crivelli's Repositories
CrivelliLab/Protein-Structure-DL
Classification and regression exploration using protein structures
CrivelliLab/OSA_Phenotyping_LLMs
Developing analytic tools for phenotyping Obstructive Sleep Apnea along clinical text.
CrivelliLab/Columbia-Suicide-Score
CrivelliLab/Deep-Protein-Scoring
LBNL SULI Spring 2018: Exploring methods of using CNNs for protein decoy scoring
CrivelliLab/InteractivePoster
Package with template interactive poster in Dash
CrivelliLab/MVP-NEWT
A simple medical Notes application built using NEWT which we can access data through Cori.
CrivelliLab/NOTE-Django
Web tool implemented by Django
CrivelliLab/OpeNNdd
Open neural network for drug discovery.
CrivelliLab/spatial-prediction
CrivelliLab/Suicide-Prediction
Uses NLP to predict suicide risk among hospital patients
CrivelliLab/Template-Repo
A template repo for organizing research projects, and guidelines for archiving and documenting.
CrivelliLab/Tools-for-Multiscale-Method
Computational Tools for Multiscale Molecular Dynamics Simulation
CrivelliLab/VA_facilities_analysis
This repository contains info for distance/driving hours of county-level centroid points to nearby facilities and VA facilities waiting time
CrivelliLab/Altitude_vs_SuicideRate_in_VA
association between altitude and suicide deaths, suicide attempts, and suicidal ideation among U.S. veterans at both the patient and geospatial level
CrivelliLab/Geospatial_Analsyis
CrivelliLab/Glossary
This repository describes and defines methods used by our research group.
CrivelliLab/HOOD_MIMIC4
For summer 2023.
CrivelliLab/misc
CrivelliLab/NILE-HPC
Python3 wrapper for NILE with MPI capability
CrivelliLab/Protein-Structure-Exploration
A collection of utilities to aid in the visual rendering of 3D protein structures and the transposition of those 3D structures into 2D images for use in training convolutional neural networks.
CrivelliLab/Suicide-NLP-Analysis
Jupyter notebooks for the NLP suicide analysis
CrivelliLab/unstructured-mimiciii-analysis