Cytomine ULiège
This is the ULiège R&D Cytomine version (2010-...) with experimental features. For official Community edition, support & demo account see @cytomine.
Liège, Belgium
Pinned Repositories
Cytomine-bootstrap
This repository hosts the Cytomine Community ULiège Legacy Edition. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-community-edition
Cytomine Community ULiège Edition. See @cytomine for official releases.
Cytomine-core
This repository hosts the legacy Cytomine-Core, which is the main web server implementing the Cytomine API. Our ULiège fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-core-spring
Cytomine ULiège Core in Spring Boot. See @cytomine for official releases.
cytomine-frontend
Front-end experimentations in VueJS. Basis for a future modernized version of the whole webUI application.
Cytomine-IMS
Cytomine-IMS: Image Management System. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-python-client
Client to interact with Cytomine API in Python. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-Web-UI
Cytomine-Web-UI is the graphical user interface for Cytomine. Our fork includes R&D experimental features. See @cytomine for official releases.
iipsrv
iipsrv is an advanced high-performance feature-rich image server for web-based streamed viewing and zooming of ultra high-resolution images.
S_CellDetect_Stardist_HE_ROI
Cell (Nuclei) Detection in ROI using Stardist
Cytomine ULiège's Repositories
Cytomine-ULiege/S_CellDetect_Stardist_HE_ROI
Cell (Nuclei) Detection in ROI using Stardist
Cytomine-ULiege/Cytomine-core
This repository hosts the legacy Cytomine-Core, which is the main web server implementing the Cytomine API. Our ULiège fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-python-client
Client to interact with Cytomine API in Python. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-Web-UI
Cytomine-Web-UI is the graphical user interface for Cytomine. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-bootstrap
This repository hosts the Cytomine Community ULiège Legacy Edition. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-ULiege/Dockerfiles
Dockerfiles used to compile Cytomine docker images. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-BioFormats
A BioFormats wrapper for Cytomine PIMS
Cytomine-ULiege/Cytomine-community-edition
Cytomine Community ULiège Edition. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-HMS
Hyperspectral Management System
Cytomine-ULiege/Cytomine-installer
Cytomine ULiège Installer. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-java-client
Client to communicate with Cytomine API in Java. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-js-client
Client to interact with Cytomine API in Javascript. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-software-router
Cytomine module for communication between Cytomine-Core and remote processing servers. Our fork includes R&D experimental features. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-core-spring
Cytomine ULiège Core in Spring Boot. See @cytomine for official releases.
Cytomine-ULiege/pims
Python Image Management Server
Cytomine-ULiege/.github
Community health files for the @Cytomine-ULiege organization
Cytomine-ULiege/Cytomine-cbir
Content-Based Image Retrieval Server
Cytomine-ULiege/Cytomine-nginx
Cytomine NGINX ULiège configuration. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-postgis
Cytomine PostGis ULiège configuration. See @cytomine for official releases.
Cytomine-ULiege/Cytomine-project-migrator
Utility to migrate a Cytomine project from a Cytomine instance to another.
Cytomine-ULiege/pims-plugin-format-bioformats
Cytomine-ULiege/pims-plugin-format-dicom
Cytomine-ULiege/pims-plugin-format-msi
PIMS plugin to read ImzML images converted to Zarr
Cytomine-ULiege/pims-plugin-format-openslide
Cytomine-ULiege/S_Classify-DL-SVMFeat-Train
Cytomine software for image classification with deep features (model builder)
Cytomine-ULiege/S_Create_Annotations
Create annotations from a given threshold on a heatmap
Cytomine-ULiege/S_Deep-Fish-Landmark-Detection-train
Cytomine-ULiege/S_Deep-Fish-Landmark-Prediction
Cytomine-ULiege/S_Segment-CV-AdaptThres-Sample
Cytomine software. Segmentation by computer vision using an adaptive threshold on a sample
Cytomine-ULiege/S_Segment-ML-MultiOutputET-Pred-BI
Software that uses a binary segmentation model based on subwindow and multiple output extra-trees to segment an image